Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2732657 86.0 5e-12 seq902142 86.0 5e-12 >seq2732657 Length=3626 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| ||||| | || || || ||||| ||| | ||| || || Sbjct 2917 ATGCAGATATTTGTTAAAACCCTCACTGGAAAGACCATCACCTTGGAAGTAGAACCATCT 2858 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| ||||| || || ||||| | || || || Sbjct 2857 GACACCATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATTCCTCCAGACCAG 2798 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| |||||||||||||| |||| | | ||| || | || ||||| Sbjct 2797 CAGAGGCTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTGTCAGACTACAAT 2738 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || |||||||| | ||| |||| ||||| || |||| || Sbjct 2737 ATTCAGAAGGAATCTACTCTTCACTTGGTACTAAGATTGAGAGGTGG 2691 >seq902142 Length=404 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 ||||||| || || |||||||| || || | ||||| | |||||| |||||||||| Sbjct 230 CAGTCTCAGGATTTTCACATTCAGGGCAAAGAACAAATCTCTTGATGAAGCCATCAAGCA 289 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 | ||||| | || | | |||||||| || ||||| ||| | || || || ||| | | Sbjct 290 GATCCTGGAGTTTGGCAGCATCGTGGGATCCATTGACAATGTAGCGATCATTCTTGAAGT 349 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT 34478 | | || || || || || || || || || |||||||| Sbjct 350 CAAATTGTGTCTGAGCCCCAAGTTCACATCCAAAGTACTT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399001373317016