Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2595133 132 7e-25 seq2605278 123 4e-22 seq498297 123 4e-22 seq976528 104 4e-16 seq2003437 86.0 1e-10 seq1603026 86.0 1e-10 >seq2595133 Length=1749 Score = 132 bits (146), Expect = 7e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| ||||| || ||||| ||| |||| ||||| || ||| Sbjct 553 TGTATTTGGTGACAGCCTTGGTGCCCTCAGACACGGCATGCTTGGCGAGTTCACCAGGCA 494 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || |||||||| || || | ||| || ||||||||| | Sbjct 493 ACAGAAGACGAACTGCTGTCTGGATTTCCCGAGAAGTGATGGTTGAGCGCTTGTTGTAGT 434 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || |||||| | ||||||| || | ||||| || || || ||||||| Sbjct 433 GAGCCAGACGAGAGGCCTCAGCAGCGATGCGCTCAAAGATGTCATTCACGAAAGAGTTCA 374 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| |||||| || ||||| || || ||||| | |||||||| Sbjct 373 TGATAGACATGGCCTTGGAGGAGATACCGGTATCGGGATGAACTTGCTTCAACACCTTGT 314 Query 1485710 A 1485710 | Sbjct 313 A 313 >seq2605278 Length=1798 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| || || || ||||| ||| |||| ||||| || ||| Sbjct 1350 TGTATTTGGTGACAGCCTTGGTGCCTTCAGACACGGCATGCTTGGCGAGTTCACCAGGCA 1409 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || |||||||| || || | ||| || ||||||||| | Sbjct 1410 ACAGAAGACGAACTGCTGTCTGGATTTCCCGAGAAGTGATGGTTGAGCGCTTGTTGTAGT 1469 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || |||||| | ||||||| || | ||||| || || || ||||||| Sbjct 1470 GAGCCAAACGAGAGGCCTCAGCAGCGATGCGCTCAAAGATGTCATTCACGAAAGAGTTCA 1529 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| |||||| || ||||| || || ||||| | |||||||| Sbjct 1530 TGATAGACATGGCCTTGGAGGAGATACCGGTATCGGGATGAACTTGCTTCAACACCTTGT 1589 Query 1485710 A 1485710 | Sbjct 1590 A 1590 >seq498297 Length=353 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| ||||| || ||||| ||| |||| ||||| | ||| Sbjct 266 TGTATTTGGTGACAGCCTTGGTGCCCTCAGACACGGCATGCTTGGCGAGTTCACAAGGCA 207 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || |||||||| || || | ||| || ||||||||| | Sbjct 206 ACAGAAGACGAACTGCTGTCTGGATTTCCCGAGAAGTGATGGTTGAGCGCTTGTTGTAGT 147 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || |||||| | ||||||| || | ||||| || || || ||||||| Sbjct 146 GGGCCAGACGAGAGGCCTCAGCAGCGATGCGCTCAAAGATGTCATTCACGAAAGAGTTCA 87 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| |||| | || ||||| || || ||||| | |||||||| Sbjct 86 TGATAGACATGGCCTTGGAGGAGTTACCGGTATCGGGATGAACTTGCTTCAACACCTTGT 27 Query 1485710 A 1485710 | Sbjct 26 A 26 >seq976528 Length=414 Score = 104 bits (114), Expect = 4e-16 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| ||||| || ||||| ||| |||| ||||| || ||| Sbjct 68 TGTATTTGGTGACAGCCTTGGTGCCCTCAGACACGGCATGCTTGGCGAGTTCACCAGGCA 127 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || |||||||| || || | ||| || ||||||||| | Sbjct 128 ACAGAAGACGAACTGCTGTCTGGATTTCCCGAGAAGTGATGGTTGAGCGCTTGTTGTAGT 187 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || |||||| | ||||||| || | ||| | || || || ||||||| Sbjct 188 GAGCCAGACGAGAGGCCTCAGCAGCGATGCGCTCAAAGATGGCATTCACGAAAGAGTTCA 247 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696 |||| | | | | ||| |||||| || ||||| || || ||| Sbjct 248 TGATAGCCCTGGCCTTGGAGGAGATACCGGTATCGGGATGAACTTGC 294 >seq2003437 Length=735 Score = 86.0 bits (94), Expect = 1e-10 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||| |||||| ||||| ||||| || || || || ||||| ||| | || ||||| Sbjct 416 AGGTTGACCAAGGTACCCTGTTTGAATTAATTCTTGCTGCCAATTACTTGGATATCAAAG 475 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| | ||| | ||||| || || |||||| | ||||||||||| | ||||| | Sbjct 476 GCCTCTTAGATGTCACATGCAAAACTGTTGCCAACATGATCAAGGGCAAAACTCCCGATG 535 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || || || || || || |||||| ||| Sbjct 536 AAATTCGAAAAACATTCAATATCAAGAACG 565 >seq1603026 Length=547 Score = 86.0 bits (94), Expect = 1e-10 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 1485499 GAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCG 1485558 || ||||| ||| |||| ||||| || ||| | || || || || |||||||| || Sbjct 546 GACACGGCATGCTTGGCGAGTTCACCAGGCAACAGAAGACGAACTGCTGTCTGGATTTCC 487 Query 1485559 CGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATG 1485618 || | ||| || ||||||||| | | ||||| || ||| || | ||||| Sbjct 486 CGAGAAGTGATGGTTGAGCGCTTGTTGTAGTGAGCCAGACGAGAGGCGTCAGCAGCGATG 427 Query 1485619 CGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCC 1485678 || || | ||||| || || | ||||||||||| | ||| | |||| |||||| || Sbjct 426 CGCTCAAAGATGTCATTCACGAGAGAGTTCATGATAGTCATGGCCTTGTAGGAGATACCG 367 Query 1485679 ACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 ||||| | || ||||| | ||||||||| Sbjct 366 GTATCGGGATAAACTTGCTTCAACACCTTGTA 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7623640618562568