Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq2645534 102 1e-16 >seq2645534 Length=2039 Score = 102 bits (112), Expect = 1e-16 Identities = 129/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 || |||||||||||| | |||| | |||| || || ||| ||| | ||||||||| Sbjct 202 ATCAAGGTTGCTCAGCTAGCTGGTGCCGTTGCTGAGCACTCTGCGTATCATCATGGTGAA 261 Query 172946 CAAAACCTTTGTGA-AACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACAT 173004 ||| | || || ||| || || || || ||||| | ||||| ||| |||| ||||| Sbjct 262 CAAT-CTTTAATGGGAACCATTATCAACTTGGCACAAAACTTTGTTGGTTCAAACAACAT 320 Query 173005 AACATTACTTGAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGAT 173059 | || || |||| |||||||||||||||||||||| |||| || |||||| Sbjct 321 CAACTTGCTGCAACCCATTGGTCAGTTTGGTACTAGACTTCAAGGTGGCAAAGAT 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632748918008000