Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2732657 86.0 1e-11 >seq2732657 Length=3626 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/139 (73%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC------ 81697 |||||| |||||||||| || || |||||||| | || | || ||||| ||| Sbjct 3402 AGAGTAGATTCCTTCTGAATGTTGTAATCAGACAATGTACGACCATCTTCCAACTGCTTT 3461 Query 81698 -----AAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 |||||| | || ||||| ||||| | || ||||||||||||| ||||| ||| Sbjct 3462 CCAGCAAAGATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGCT 3521 Query 81753 TTTATATTTTCAATCGTAT 81771 || | ||||||||| |||| Sbjct 3522 TTGACATTTTCAATGGTAT 3540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 872348399640320