Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2750648 105 6e-18 seq2732657 89.7 5e-13 >seq2750648 Length=12224 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||||||||| || | || |||||||||||||| || || | || ||| Sbjct 11035 CAAAACCAAATGAATTGTAGATTCTTTTTGAATGTTATAATCAGTAATACATTTATTATC 10976 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | |||||||||| | |||| ||||||||||| ||||| || |||||||| || Sbjct 10975 TTCTAATTGTTTACCGGCGAAAATTAATCGCTGTTGATCGGGAGGAATACCTTCTTTGTC 10916 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||||||||| | | ||| | || || || || ||||| | || | || Sbjct 10915 TTGTATTTTTTGTTTAAGTTTTTCTATTGTCTCTCCCGATTCTACTTCTATAGTAATTGT 10856 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || ||||||| ||| || ||||| Sbjct 10855 CTTACCAGTGAGTGTTTTTACGAATATTTGCAT 10823 >seq2732657 Length=3626 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | | || || || ||||||||||| || || |||||| |||||| Sbjct 1797 ACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCTGACAATGTACGCCCATCTTCC 1856 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| || | ||| |||||||| || ||||| || || || Sbjct 1857 AGCTGCTTGCCTGCAAAGATCAGTCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGG 1916 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| ||| | | ||| | || || | || || ||||| | || | || || Sbjct 1917 ATCTTTGCTTTTACATTTTCAATTGTGTCAGAGGGTTCAACTTCCAAAGTGATGGTCTTT 1976 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || | ||| |||||||| Sbjct 1977 CCAGTGAGGGTCTTCACGAAGATCTGCAT 2005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460223448160320