Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2738736 125 5e-24 >seq2738736 Length=4073 Score = 125 bits (138), Expect = 5e-24 Identities = 127/163 (78%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 111774 CAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGG 111833 ||||||||| | || ||||||||||| ||||| ||| |||||||||||||| || || Sbjct 2029 CAAACCAGTTACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGG 1970 Query 111834 CACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGA 111893 || || || ||||||||| | |||||||| |||||||| || || |||| | | Sbjct 1969 AACTCCAAGACCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGC 1910 Query 111894 CACATAAAATTGACAAAGTACA-TGACAAGGAGGCAATGCCAT 111935 ||||||||| ||||| || ||| || || |||||||| ||||| Sbjct 1909 CACATAAAACTGACACAG-ACAGTGGCATGGAGGCAAGGCCAT 1868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378805897142056