Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2738736 120 3e-22 >seq2738736 Length=4073 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579 ||||| |||| || | || | ||||| || ||||| ||| ||| | | | ||| Sbjct 1811 AACCCAAATGATCGACGCATAATCATGTGTGCTTGGAATCCGGTTGATGTTCTTAAAATG 1870 Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639 || | || || |||||| || || || || || || || ||||| || || || ||| Sbjct 1871 GCCTTGCCTCCATGCCACTGTCTGTGTCAGTTTTATGTGGCTAATGGAGAACTCTCTTGC 1930 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699 ||||| || ||| |||| | ||| ||||| | || || || ||||||||||||||||| Sbjct 1931 CAGCTATACCAAAGATCAGCAGATATGGGTCTTGGAGTTCCTTTCAACATTGCTAGTTAT 1990 Query 34700 GCTCTGCTCACGTACATGATCGCTCATGT 34728 ||||| ||||| |||||||| || ||||| Sbjct 1991 GCTCTTCTCACCTACATGATTGCCCATGT 2019 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||| || |||||||| ||||| ||||| ||||||||||||||||| || || || | Sbjct 2019 ACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGGAACTCCAAGA 1960 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||| ||| | |||| ||| || |||||||| || || || ||||| || || || || Sbjct 1959 CCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGCCACATAAAAC 1900 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || || || |||||| || || | ||||| | | | ||| ||| ||||| || Sbjct 1899 TGACACAGACAGTGGCATGGAGGCAAGGCCATTTTAAGAACATCAACCGGATTCCAAGCA 1840 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTT 6825 ||||| | || | || |||| ||||| Sbjct 1839 CACATGATTATGCGTCGATCATTTGGGTT 1811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433237808425256