Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2738736 131 1e-25 >seq2738736 Length=4073 Score = 131 bits (144), Expect = 1e-25 Identities = 166/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776 || || || || || |||||||| ||||| |||| || || || ||||| || || || Sbjct 2025 CCAGTTACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGGAACT 1966 Query 29777 CCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACG 29836 || || ||||| || |||| || ||||| |||||||| ||||| ||||| | ||| Sbjct 1965 CCAAGACCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGCCACA 1906 Query 29837 TAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTT 29895 ||||||||||||| | || ||||| ||||| | |||||| | | || || || Sbjct 1905 TAAAACTGACACA-GACAGTGGCATGGAGGCAAGGCCATTTTAAGAACATCAACCGGATT 1847 Query 29896 CCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATG 29941 ||| ||||||| ||| ||||| | || | |||||||||| ||||| Sbjct 1846 CCAAGCACACATGATTATGCGTCGATCATTTGGGTTGTTCTTGATG 1801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392546862018832