Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8136 109 6e-19 >seq8136 Length=40417 Score = 109 bits (120), Expect = 6e-19 Identities = 282/428 (66%), Gaps = 4/428 (1%) Strand=Plus/Plus Query 16780 CAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTT 16839 ||||||| | | | ||||| || ||||| || || || || ||| | | |||||| Sbjct 18891 CAGTTCGACCAAAAGCCTATCGGCCACAAACTCAATGTACTGCTTCATGAGCTGGCAGTT 18950 Query 16840 CATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGC 16899 |||||| || | || || || || | |||| |||| ||||| || || || Sbjct 18951 CATTCCAATCATGTCCACGGGTAGTGCCTTAGTCAGAAATTCCTGCTCGATTGTCACGGC 19010 Query 16900 TTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTA--AGATGTTTAAAC 16957 || |||||| || |||| || | |||| || |||| | |||||||| ||| Sbjct 19011 ATCGGCAATAATCGCAGTGACTCTCTCTTTCGACG--GTTTGTTGACCAGATGTTTGAAC 19068 Query 16958 ATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAAT 17017 || || || || || ||||| || | |||||||| | ||| | ||||| || Sbjct 19069 ATGAGGCAGGCAAAGTCGCAGTGGAGGCCCTCGTCGCGCGAGATCAACTCGTTGCTGAAG 19128 Query 17018 GTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAA 17077 || | || ||||| || || ||||| | ||| || || |||||||| || || Sbjct 19129 GTAAGTCCAGGCATAACGCCACGCTTCTTCAGCCAGAAGATGGCGGCGAAACTACCGGAG 19188 Query 17078 AAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTG 17137 ||||| || || || || | ||||| ||||||| |||||||| |||| | | | Sbjct 19189 AAGAAAATGCCTTCCACCGCAGCAAAAGCGATTACACGTTCGGCAAACGTGGACTGATCA 19248 Query 17138 TTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATG 17197 | ||||| ||| | |||| |||||||| |||| | |||| ||| ||||| || Sbjct 19249 TCCGCTATCCACTTCAGGGCCCAGTCGGCTTTGCGCTTAACGCAAGGCATGGTTTCGATT 19308 Query 17198 GCCTTAAA 17205 || || || Sbjct 19309 GCATTGAA 19316 Score = 102 bits (112), Expect = 8e-17 Identities = 212/316 (67%), Gaps = 0/316 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || || || | ||||||||| || ||||| | ||||||||| || | ||| Sbjct 19401 ATGTAAGTCTCAATTAGCATGCTGTACATCTCCGAGTGGACGTTCTCCATAGCGACCTGG 19460 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||||||||| ||||| || | | ||| || ||| ||| | || | ||| Sbjct 19461 AACCCGTAAAAGCAGCGGGCCTCTGTCACTTGCACCTCCTGCCCGAACCTCTCGACCAGA 19520 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| || || |||||||| || || | | || ||||| | Sbjct 19521 TTCTCGTTGACGATCCCATCCGAGGCGGCGAAGAAGGCGAGGACGTGGGATATGAAGTGG 19580 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 ||||| | || ||||| ||| | ||| |||| | |||||| || || Sbjct 19581 CGCTCGTCGTCGTTCAGCTTCTCCCAGTACTTCAGGTCTCTGGAGAGATCCACCTCCTCC 19640 Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATG 17533 |||||| || ||| ||||||| || ||||| |||||| || ||||| ||| Sbjct 19641 ACGGTCCAGAAGGACGCCTCTGCCTTCTTGTACATGGCCCAAATGTCGGGGTATTTGATG 19700 Query 17534 GGGAATACAACATATC 17549 ||||| || ||| ||| Sbjct 19701 GGGAAGACCACAAATC 19716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517118941876680