Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq8136 102 8e-17 >seq8136 Length=40417 Score = 102 bits (112), Expect = 8e-17 Identities = 274/414 (66%), Gaps = 4/414 (1%) Strand=Plus/Plus Query 16034 CTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAA-GTCG 16092 ||||| || ||||| || || || || ||| | | ||| || ||||| || | ||| Sbjct 18907 CTATCGGCCACAAACTCAATGTACTGCTTCATGAGCTGGCAGTTCATTCCAATCATGTCC 18966 Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATC 16152 || || || || || || | ||||| || || || || || || ||| || | Sbjct 18967 -ACGGGTAGTGCCTTAGTCAGAAATTCCTGCTCGATTGTCACGGCATCGGCAATAATCGC 19025 Query 16153 GGTGGCTCG-TGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGT 16211 ||| ||| | |||| |||||| | | | || ||||| ||||| || || || |||| Sbjct 19026 AGTGACTCTCTCTTTC-GACGGTTTGTTGACCAGATGTTTGAACATGAGGCAGGCAAAGT 19084 Query 16212 CGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTT 16271 |||| || || || ||||| | ||| | |||||| || || | || ||||| Sbjct 19085 CGCAGTGGAGGCCCTCGTCGCGCGAGATCAACTCGTTGCTGAAGGTAAGTCCAGGCATAA 19144 Query 16272 TTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAA 16331 || || ||||| | |||||| || || || || || || ||||| || || || | Sbjct 19145 CGCCACGCTTCTTCAGCCAGAAGATGGCGGCGAAACTACCGGAGAAGAAAATGCCTTCCA 19204 Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCT 16391 | | ||||||||||||| ||||| || |||| | | | || ||||| ||| Sbjct 19205 CCGCAGCAAAAGCGATTACACGTTCGGCAAACGTGGACTGATCATCCGCTATCCACTTCA 19264 Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445 | |||| |||||||| | || | ||| ||| ||||| || || || |||| Sbjct 19265 GGGCCCAGTCGGCTTTGCGCTTAACGCAAGGCATGGTTTCGATTGCATTGAACA 19318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510992796361320