Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq29144 113 4e-20 seq60059 86.0 5e-12 >seq29144 Length=118640 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||||| ||| | ||| || ||||| || ||||| ||||| | Sbjct 105181 CCGCCCCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 105122 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||| ||| || || || | || || | ||||||||| ||| Sbjct 105121 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 105062 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||||| |||||| | | | || || | |||||| | Sbjct 105061 ATACCCTCCTTATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACT 105002 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||| || | ||||||||| || || ||||| Sbjct 105001 TCGAGGGTAATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || |||||||| || ||||| ||||| | Sbjct 105865 CCGCCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 105806 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||||||||| ||||| || | || || | ||||||||| || Sbjct 105805 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGG 105746 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | ||| || || ||||| Sbjct 105745 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACC 105686 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||||||||| | || || || || || ||||| Sbjct 105685 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| ||| | ||||||||||| || ||||| ||||| | Sbjct 105409 CCGCCACGAAGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 105350 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| ||||| || | || || | ||||||||| || Sbjct 105349 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 105290 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| || || | ||||| Sbjct 105289 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACC 105230 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || | || || || || |||||||| Sbjct 105229 TCCAACGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | || |||||||| || ||||| ||||| |||||| || | ||| Sbjct 104168 AGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 104109 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| || | || || | ||||||||| || | || ||||| || Sbjct 104108 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCCTCCTTATCC 104049 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | ||| ||||| | ||||| || | ||| |||||| Sbjct 104048 TGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTCAAGGGTGATGGTC 103989 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || || ||||| || || ||||| Sbjct 103988 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| || | || |||||||| || ||||| ||||| | Sbjct 105637 CCACCACGCAGGCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 105578 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || | | ||||||||| || Sbjct 105577 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGG 105518 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | ||| ||||| | ||||| Sbjct 105517 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACC 105458 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | ||| || || || || ||||| Sbjct 105457 TCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| ||| | || |||||||| || || ||||| || | Sbjct 103955 CCACCACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTC 103896 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || | || || | |||||| || ||| Sbjct 103895 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 103836 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || ||||| ||||| | ||| || || | ||||| Sbjct 103835 ATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACC 103776 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | ||||| ||||| || ||||| Sbjct 103775 TCAAGCGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| ||| | || |||||||| || ||||| || || | Sbjct 104497 CCGCCACGAAGCCTGAGCACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTC 104438 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| ||||| || | || || | |||||| || ||| Sbjct 104437 AGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGA 104378 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| || || | ||| || || | ||||| Sbjct 104377 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACC 104318 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || || || || || || || ||||| Sbjct 104317 TCAAGAGTGATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||||| ||| | ||| || ||||| || ||||| ||||| | Sbjct 104725 CCGCCGCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 104666 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||| ||| || || || | || || | ||||||||| ||| Sbjct 104665 AGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 104606 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | ||||| | ||||| Sbjct 104605 ATGCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACC 104546 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || || || || ||||| Sbjct 104545 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||| || |||||||| || || || ||||| ||| || || | ||| Sbjct 104938 AGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCC 104879 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| || | || || | ||||||||| || | ||||||||||| Sbjct 104878 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 104819 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | || || | ||||| || | || |||||| Sbjct 104818 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGATGGTC 104759 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || || || || |||||||| Sbjct 104758 TTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 >seq60059 Length=115218 Score = 86.0 bits (94), Expect = 5e-12 Identities = 124/167 (74%), Gaps = 10/167 (6%) Strand=Plus/Minus Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788 |||||||| || ||||||||| |||||||||||| || ||||| |||| | ||||||| Sbjct 49269 GGCGGCGTCGGCTTGAACCTGATGGGCGGCAACCACCTCTTCATGATGGACCTGCACTGG 49210 Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAGAAAAAGCGC 38848 || ||||| | || |||||| ||||| | || || ||||| |||| || | Sbjct 49209 AATCCGCAGCTGGAAGCGCAGGCTTGCGACCGGGTGCATCGGATGGGGCAGACCAA--GG 49152 Query 38849 ACGT--ACGTGTACAAGATGATTGTTGACGAGGAGAACAGCATTGAG 38893 |||| ||||| || |||| ||||| || ||| || ||||||||| Sbjct 49151 ACGTCCACGTGCAC-AGAT--TTGTT-AC-CGGA-AAGAGCATTGAG 49111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421919797423916