Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq29144 129 5e-25 seq16489 116 3e-21 >seq29144 Length=118640 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || |||||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 105391 ACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCA 105332 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| ||||| | || ||||||||| Sbjct 105331 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 105272 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | | |||| | | ||| ||||||| || || ||||| Sbjct 105271 ATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTGATGGTCTTT 105212 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| ||||||||||| Sbjct 105211 CCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||||||| |||| || |||| || Sbjct 105619 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCA 105560 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||| ||||| |||||||| || | |||||||||||| Sbjct 105559 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGG 105500 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | | || | | ||| ||||||| ||| || |||||| Sbjct 105499 ATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTTG 105440 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||| ||||| Sbjct 105439 CCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||||||| |||| ||| |||| ||| Sbjct 105847 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCC 105788 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| || || | || ||||||||| Sbjct 105787 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGG 105728 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||| ||||||| ||| || |||||| Sbjct 105727 ATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATGGTCTTG 105668 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 105667 CCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| ||||| || ||||||||| || ||||||||| |||| ||| | || ||| Sbjct 104935 ACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCCTCC 104876 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| ||||| | || ||||||||| Sbjct 104875 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 104816 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | | ||| ||||| | || || |||||| Sbjct 104815 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGATGGTCTTG 104756 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| ||||||||||| Sbjct 104755 CCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| |||| ||| | || |||| || || |||||||| Sbjct 105145 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAACTGCTTACCGGCGAAG 105086 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| ||||| || || | ||||||||| ||| || ||| || || | Sbjct 105085 ATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGGATCTTTGCTTTCACGTTC 105026 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | | |||||| || | |||||| |||||||| ||||| || || || Sbjct 105025 TCAATGGTGTCGCTAGGCTCCACTTCGAGGGTAATGGTCTTGCCAGTCAGCGTTTTGACG 104966 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 104965 AAGATCTGCAT 104955 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 45112 ACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAG 45171 |||||| | || | |||||||| ||||| ||||||||| |||||||||||| |||| Sbjct 104181 ACCTCTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAG 104122 Query 45172 TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCAC 45231 ||| | || || || || || || ||||| |||| ||||| ||||| || || | Sbjct 104121 GGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGAT 104062 Query 45232 ACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTC 45291 |||||||| ||| || || ||| || | | | | | || | | ||| ||||| Sbjct 104061 CCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTC 104002 Query 45292 CACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | ||| || |||||||| |||| ||||| || ||||| ||||| Sbjct 104001 AAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| |||| ||| | || |||| || || || ||||| Sbjct 104689 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAG 104630 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| ||||| || || | || |||||||| || || ||| || | Sbjct 104629 ATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTC 104570 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | | || | | ||| ||||| | || || |||||||| || || |||||||| Sbjct 104569 TCAATGGTATCGCTAGGCTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACG 104510 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 104509 AAGATCTGCAT 104499 >seq16489 Length=130489 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| |||| ||| | || |||||||| || || || || Sbjct 52107 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGTTGCTTCCCAGCAAA 52166 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 52167 AATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 52226 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| |||||||||| | ||| || ||||| ||||||| |||||| || Sbjct 52227 CTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTCAAAGTCTTGAC 52286 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 52287 AAAGATCTGCAT 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394757647319971