Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq8136 120 6e-22 seq42356 100 6e-16 >seq8136 Length=40417 Score = 120 bits (132), Expect = 6e-22 Identities = 225/330 (68%), Gaps = 3/330 (1%) Strand=Plus/Minus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 || |||||||| || ||||| || ||||| ||| ||||| |||| |||||| | Sbjct 19217 GCTTTTGCTGCGGTGGAAGGCATTTTCTTCTCCGGTAGTTTCGCCGCCATCTTCTGGCTG 19158 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||||| | || || ||||||| || |||| | ||| ||||| || || | ||||| Sbjct 19157 AAGAAGCGTGGCGTTATGCCTGGACTTACCTTCAGCAACGAGTTGATCTCGCGCGACGAG 19098 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100 || || || |||||||||| ||| | |||| ||| | | | || | | || || Sbjct 19097 GGCCTCCACTGCGACTTTGCCTGCCTCATGTTCAAACA---TCTGGTCAACAAACCGTCG 19041 Query 102101 AGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACA 102160 | ||| || | || ||| | | || ||||| ||| || || |||||||| || Sbjct 19040 AAAGAGAGAGTCACTGCGATTATTGCCGATGCCGTGACAATCGAGCAGGAATTTCTGACT 18981 Query 102161 GTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAA 102220 | || || || | | | |||||||||||| || | |||| ||||||||||| Sbjct 18980 AAGGCACTACCCGTGGACATGATTGGAATGAACTGCCAGCTCATGAAGCAGTACATTGAG 18921 Query 102221 TTTGTGGCAGATAAACTATTGGTTGAAATG 102250 |||||||| |||| || ||||| ||| || Sbjct 18920 TTTGTGGCCGATAGGCTTTTGGTCGAACTG 18891 >seq42356 Length=8389 Score = 100 bits (110), Expect = 6e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 ||||| || | || ||||| | || || | | || || |||||||| || |||| Sbjct 3883 CCTCCTGCTGACTGCGAGATAAGAGCACACTGCATCAGTGTTTCATAAATTCCTAGAATG 3824 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || |||||| | | | ||||||||||| ||||| ||||| || | || ||| | Sbjct 3823 CTGTCATCTCGCATGGTGAGAAGGAAGCAGGAGGAGAGTTGAGGCTTAGGGGTGCCAGCA 3764 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || || ||||||||||||||||| || | | | || | |||| ||||| || Sbjct 3763 TTGAAGAGAGTGGGGGAAGCATGGGTGAACCACTTCTCAGAGAGCAGATTGTATGTCTCG 3704 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 || || | | || |||||| ||||| || | ||||||||| | ||||| ||| Sbjct 3703 ATAACTGCAGCAACATCATCTCCGTGGATGCCAACTGACACACGCATCAGCATGTGTTGA 3644 Query 95032 GGGCGCTC 95039 |||||||| Sbjct 3643 GGGCGCTC 3636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988747804303205