Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq42356 279 7e-70 >seq42356 Length=8389 Score = 279 bits (308), Expect = 7e-70 Identities = 725/1096 (66%), Gaps = 26/1096 (2%) Strand=Plus/Minus Query 64829 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 64888 |||||||| |||||| |||||||| || || || || || | || || ||||| || Sbjct 5803 CTTGTCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCC 5744 Query 64889 CGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 64947 ||||| ||||| || || ||| || || | |||||| | || ||| ||| Sbjct 5743 TGTTTTCAGACC-AGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCG 5685 Query 64948 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 65007 | | ||| || ||||| |||| || || || || || ||| | || || | ||| |||| Sbjct 5684 GCTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCAG 5625 Query 65008 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 65067 |||| || || | ||||| |||| |||||||| | ||||| || | | ||| | | Sbjct 5624 CCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGT 5565 Query 65068 CTTCTGGAAGGT--TTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124 | | ||| | ||| | | |||||||| |||||||| || || ||| ||||||| Sbjct 5564 CGTTTGGGATCCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTGA 5505 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184 ||| |||| | || ||| || | || | || || || | || || || | Sbjct 5504 CTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACCT 5445 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 |||| || || |||| || | || || | |||| || || | || | ||||| Sbjct 5444 GAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGACT 5385 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304 |||| || || | ||| ||||| |||||||| || ||||| || |||| | || || Sbjct 5384 CATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAAT 5325 Query 65305 TTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 65362 | | || || ||| | | ||||| ||||| || | | |||||| ||| || || | Sbjct 5324 TGCGTAGCCC--ATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAGT 5267 Query 65363 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 65421 || || || || | || || ||||| | || ||| | | Sbjct 5266 TGGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCT-CGT 5208 Query 65422 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 65481 | || || ||||| || | ||||||||| |||||||| || ||||| | |||| | || | Sbjct 5207 AAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGT 5148 Query 65482 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 65541 | || || || || |||| |||| ||| ||||||||| || ||||||||||| Sbjct 5147 ACATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATGGATAGC 5088 Query 65542 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 65601 | | ||| || || ||||| | |||||||||||||| || || || | ||||||| Sbjct 5087 GCATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCA 5028 Query 65602 TATTAGAGATTTCA---GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 65658 | ||||| | || || || |||| || || || || | || || ||||| || | Sbjct 5027 TGTTAGA---TGCACGTGCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCA 4971 Query 65659 GATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TCGC-T 65712 | || | |||| ||| | || ||| | ||| || ||||||| | | || | Sbjct 4970 GGTTGCGTGTGAC---TACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGTGGCAT 4914 Query 65713 CATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 65772 || ||||||||||||| ||||| ||||||||||| || || || | |||| | Sbjct 4913 CAGGGCGAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTG 4854 Query 65773 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 65832 || || || | |||||||| || || || || ||||| ||||| || | ||| | Sbjct 4853 CAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCT 4794 Query 65833 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 65892 | || || ||| ||| || ||||| || || | ||||||||||||||||| || | Sbjct 4793 GCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCA 4734 Query 65893 TCTGAGATTCTATAAT 65908 ||| | ||| ||||| Sbjct 4733 CCTGGGCTTCAATAAT 4718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657630210570840