Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq29144 120 3e-22 seq8136 98.7 1e-15 >seq29144 Length=118640 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||| || || ||||| |||||||||| |||| ||||||||||| Sbjct 104473 TGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCGAGCTGC 104414 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || ||||| |||| ||||| |||||||| || || ||||| || || || ||| || Sbjct 104413 TTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGGATCTTG 104354 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | |||||| | ||||| ||||||| || | |||||||| ||| Sbjct 104353 GCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACCTCAAGAGTGATGGTCTTGCCAGTC 104294 Query 139742 AACGTTTTTACGAATATTTGCATA 139765 || || || ||||| || |||||| Sbjct 104293 AAGGTCTTAACGAAGATCTGCATA 104270 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || ||||||| ||| ||||| || || ||||| || ||||||| |||| Sbjct 104171 CGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 104112 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || ||||| ||||||| || ||||| || || || || || || || Sbjct 104111 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCCTCCTTA 104052 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || ||| | ||||| ||||||| ||| | Sbjct 104051 TCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTCAAGGGTGATG 103992 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||||||||| || || ||||| || |||||| Sbjct 103991 GTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 103956 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | |||| || | ||| | || ||||| || || ||||| || ||| Sbjct 105868 TGGCCGCCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 105809 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 |||| |||| ||| || ||||| || || || ||||||| || ||||| || || Sbjct 105808 CTCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGT 105749 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || ||||| ||||| ||| || || | | || | ||||||| ||||| Sbjct 105748 GGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCG 105689 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | ||| | ||||||||||||| || || ||||| || |||||| Sbjct 105688 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 105638 >seq8136 Length=40417 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 52573 GATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCG 52632 || ||||| |||| ||||| | | || | |||| |||||||||||| | |||| Sbjct 19274 GACTGGGCCCTGAAGTGGATAGCGGATGATCAGTCCACGTTTGCCGAACGTGTAATCGCT 19215 Query 52633 TTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA- 52691 |||||| |||||||| | || || || |||||||| || || || || | | || Sbjct 19214 TTTGCTGCGGTGGAAGGCATTTTCTTCTCCGGTAGTTTCGCCGCCATCTTCTGGCTGAAG 19155 Query 52692 AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGG 52751 || | | ||| | ||||| || || || || |||||||||||||| ||||||||||| || Sbjct 19154 AAGCGT-GGCGTTATGCCTGGACTTACCTTCAGCAACGAGTTGATCTCGCGCGACGAGGG 19096 Query 52752 AATGCACACAGATTTTGCGTG 52772 | ||| || ||||| || Sbjct 19095 CCTCCACTGCGACTTTGCCTG 19075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495655051039200