Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq42356 271 1e-67 >seq42356 Length=8389 Score = 271 bits (300), Expect = 1e-67 Identities = 728/1099 (66%), Gaps = 32/1099 (3%) Strand=Plus/Minus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||||| |||||| |||||||| || || || || || | || || ||||| || Sbjct 5803 CTTGTCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCC 5744 Query 78768 CGTTTTTAGACCGAGACT-CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 ||||| ||||| || || ||| || || | |||||| | || ||| ||| Sbjct 5743 TGTTTTCAGACC-AGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCG 5685 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 | | ||| || ||||| |||| || || || || || ||| | || || | ||| |||| Sbjct 5684 GCTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCAG 5625 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946 |||| || || | ||||| |||| |||||||| | ||||| || | | ||| | | Sbjct 5624 CCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGT 5565 Query 78947 CTTCTGGAAGGT--TTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 | | ||| | ||| | | |||||||| |||||||| || || ||| ||||||| Sbjct 5564 CGTTTGGGATCCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTGA 5505 Query 79004 TCTCTTCAT---TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 79060 ||||| |||| | || ||| || | || | || || || | || || | Sbjct 5504 ---CTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGA 5448 Query 79061 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCG 79120 | ||||| || || |||| || | || || | |||| || || | || | | Sbjct 5447 CCTGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAG 5388 Query 79121 ATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAAC 79180 | ||||| || || | ||| ||||| |||||||| || ||||| || |||| | || Sbjct 5387 ACTCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATG 5328 Query 79181 TATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATC 79238 ||| | || || ||| | | ||||| ||||| || | | |||||||||| || || Sbjct 5327 AATTGCGTAGCCC--ATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTC 5270 Query 79239 AGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGC-GTATGATCCTG 79297 || ||| ||| ||| | ||||| || || | || || || || | | ||| Sbjct 5269 AGTTGGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTC 5210 Query 79298 TGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGT 79357 ||| || ||||| || || | ||| || || | |||||| || ||||| | ||| | | Sbjct 5209 -GTAAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCAT 5151 Query 79358 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGAT 79417 | || || || || || |||| |||||||| |||||||| || |||||||||| Sbjct 5150 AGTACATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATGGAT 5091 Query 79418 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 79477 | | | ||| || || ||||| | |||||||||||||| || || || | ||||| Sbjct 5090 AGCGCATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTC 5031 Query 79478 TCTTATTAGAAATTTCA---GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534 || | ||||| | || || || |||| || || || || | || || ||||| | Sbjct 5030 TCATGTTAGA---TGCACGTGCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGT 4974 Query 79535 TGAGATTCC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC 79591 | || || | |||| ||| | || ||| | || || ||||||| | Sbjct 4973 TCAGGTTGCGTGTGAC---TACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGTGG 4917 Query 79592 CATC---TATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT 79648 |||| ||||||||||||| || || ||||||||||| || || || | |||| Sbjct 4916 CATCAGGGCGAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCAT 4857 Query 79649 TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAAT 79708 ||| || || | || ||||| || ||||| || ||||||||||| || | || Sbjct 4856 CTGCAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACAT 4797 Query 79709 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTT 79768 | || || || ||| ||| || ||||| || || | ||||| ||||||||||| | Sbjct 4796 TCTGCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCT 4737 Query 79769 CAATCTGAGATTCTATAAT 79787 | | ||| | ||| ||||| Sbjct 4736 CCACCTGGGCTTCAATAAT 4718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717676668179640