Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq8136 86.0 6e-12 >seq8136 Length=40417 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 |||||||| || || | || ||||| || || || |||||||| || | || | Sbjct 19057 AGATGTTTGAACATGAGGCAGGCAAAGTCGCAGTGGAGGCCCTCGTCGCGCGAGATCAAC 19116 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 ||||| || || | ||| ||||| | || || || || | ||| || || || ||| Sbjct 19117 TCGTTGCTGAAGGTAAGTCCAGGCATAACGCCACGCTTCTTCAGCCAGAAGATGGCGGCG 19176 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 || ||||| ||||| || || || || |||||||| || |||| ||||| ||||| Sbjct 19177 AAACTACCGGAGAAGAAAATGCCTTCCACCGCAGCAAAAGCGATTACACGTTCGGCAAAC 19236 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 | | | | | | |||||| || ||||| || | ||| |||| || | Sbjct 19237 GTGGACTGATCATCCGCTATCCACTTCAGGGCCCAGTCGGCTTTGCGCTTAACGCAAGGC 19296 Query 13882 ATTGTTTCGATTGCATTGAA 13901 || ||||||||||||||||| Sbjct 19297 ATGGTTTCGATTGCATTGAA 19316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478194257375640