Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq29144 114 9e-21 >seq29144 Length=118640 Score = 114 bits (126), Expect = 9e-21 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || |||||||| || || || || |||||||| ||||| || | | |||| || Sbjct 105620 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 105561 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||||||| | |||||||| || |||||| ||| || || || ||||| Sbjct 105560 AAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTG 105501 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||| ||| || | || |||||||||||| || || || | ||| ||||| || Sbjct 105500 GATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTT 105441 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || || || || || |||||| Sbjct 105440 GCCAGTCAGCGTCTTAACGAAGATCTGCATA 105410 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || || || |||||||| ||||| || | | | ||||| | || Sbjct 105386 ATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGCTG 105327 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||| ||| | |||| || || ||||| ||||||||||| ||||| || || Sbjct 105326 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTT 105267 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| | || ||||| |||||| || || || || || ||||| || || || Sbjct 105266 GGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTGATGGTCTTTCCAGT 105207 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || || || ||||||||| Sbjct 105206 GAGGGTCTTCACGAAGATTTGCATA 105182 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| ||||| || || || || || ||||| ||||| ||| | | | || || Sbjct 104935 ACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCCTCC 104876 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||| ||| | |||| || || ||||| ||||||||||| ||||| Sbjct 104875 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 104816 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| || | || ||||| |||||| || || || | || ||||| || Sbjct 104815 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGATGGTCTTG 104756 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || || || || || ||||||||| Sbjct 104755 CCAGTGAGGGTCTTCACGAAGATTTGCATA 104726 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 15139 ACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAG 15198 |||||| | || | || || ||||| || || || || || |||||||| ||||| || Sbjct 104181 ACCTCTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAG 104122 Query 15199 AATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAAT 15258 | | | || || | || ||||||||| | |||| || || ||||| ||| || Sbjct 104121 GGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGAT 104062 Query 15259 TCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATC 15318 || || || || || ||| ||| ||| | || |||||||||||| || || || Sbjct 104061 CCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTC 104002 Query 15319 TAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | ||| ||||| || || |||| || || || || || |||||| Sbjct 104001 AAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 103956 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207 ||| || || | ||| || || || || || || |||||||| ||||| ||| | | | Sbjct 104714 TCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCC 104655 Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267 || || || || || |||||| | |||| || || ||||| ||||| ||||| || Sbjct 104654 ATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTT 104595 Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 ||| || || ||| || | || |||||||||||| || || || | || || Sbjct 104594 GTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGAGTGAT 104535 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || || || || || || || || || |||||| Sbjct 104534 GGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATA 104498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361888088394891