Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq29144 82.4 6e-11 >seq29144 Length=118640 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| || | ||| |||||||| || ||||| ||||| || || | | ||||| Sbjct 103938 CACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTCAGCGTGCGGCCATCCTC 103879 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || || || | || || | ||||||||| ||| | |||||| || || Sbjct 103878 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTG 103819 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 ||| ||| || || | ||| || |||| |||||| || | || ||||| || Sbjct 103818 AATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACCTCAAGCGTGATGGTCTT 103759 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | ||||| |||||||| ||||| Sbjct 103758 GCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414239575581694