Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq29144 127 2e-24 seq16489 109 5e-19 >seq29144 Length=118640 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||| || | || || ||||| || | |||||||| |||| ||| | | Sbjct 103943 CGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTCAGCGTGCGGCCA 103884 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||||||||| ||||| || || || Sbjct 103883 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTA 103824 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGAT 94971 || | ||| || ||||| || ||| ||||| || || || || |||| |||||| Sbjct 103823 TCCTGAATCTTCGCCTTCACATTCTCGATGGTGTC-GCTAGGCTCAACCTCAAGCGTGAT 103765 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 ||| || ||||| || ||||||||||| |||||||| || Sbjct 103764 GGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATACT 103726 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||||| || | ||| |||||||| || | ||| || ||||||| |||| | Sbjct 104714 TCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCC 104655 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || || | ||||| | | ||||| ||||| ||||| ||||| || Sbjct 104654 ATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTT 104595 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGA 94970 ||| | || || ||||| ||| | | || || || || || || || | |||| Sbjct 104594 GTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATC-GCTAGGCTCAACCTCGAGAGTGA 104536 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| || || ||||| ||||||||||| Sbjct 104535 TGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||| |||| || || ||||| || | || || ||||||| |||| | | Sbjct 104941 CGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCA 104882 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| || |||||||| ||||| ||| Sbjct 104881 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTG 104822 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGAT 94971 || | || || ||||| ||| | | ||||| || || || || || | ||||| Sbjct 104821 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTAGGCTCAACCTCGAGAGTGAT 104763 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| || || ||||| ||||| ||||| Sbjct 104762 GGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||||| || | ||| |||||||| || | ||| || ||||||| |||| | Sbjct 105170 TCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCC 105111 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || ||| | ||||| | | ||||| ||||| || ||||| || || Sbjct 105110 ATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTT 105051 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGA 94970 || | || ||||| || ||| | | ||||| || || || || || | || | Sbjct 105050 ATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTC-GCTAGGCTCCACTTCGAGGGTAA 104992 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| || ||||| || ||||||||||| Sbjct 104991 TGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||| ||| | || || ||||| || | ||| || ||||||| ||| | Sbjct 105853 CGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCG 105794 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| ||||| || || ||||| ||| Sbjct 105793 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTG 105734 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || ||| ||||| | | ||||| || | |||||| Sbjct 105733 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATG 105674 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| ||||||||||| Sbjct 105673 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| || | ||||| ||||| || | ||| |||||||||| ||| | ||| || Sbjct 104480 CACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTC 104421 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | | ||||||||||| ||||| || || || || | Sbjct 104420 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTG 104361 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTT 94976 || || ||||||||| ||| ||||| || || || || |||| |||||||| | Sbjct 104360 GATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTCGGCTCAACCTCAAGAGTGATGGTCT 104302 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| | || || || ||||||||||| Sbjct 104301 TGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 93.3 bits (102), Expect = 4e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 94784 CCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATA 94843 ||||| | ||||| ||||||||| | || || ||||| || | ||| || ||||||| Sbjct 104180 CCTCTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGG 104121 Query 94844 GTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATA 94903 ||| | |||||| ||||| || || | ||||| | | ||||| ||||| || || Sbjct 104120 GTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATC 104061 Query 94904 CCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTC 94962 || || || || | || || ||||| || ||| || || || || || || || Sbjct 104060 CCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATC-GCTAGGCTCAACCTC 104002 Query 94963 AATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| || || || | || || || ||||||||||| Sbjct 104001 AAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || || ||||| || | ||| || ||||||| || | ||||| Sbjct 105619 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCA 105560 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || | ||||| || | ||||| || || || || || || ||||| | Sbjct 105559 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGG 105500 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| ||| || || || || || || || | |||||||| || Sbjct 105499 ATCTTGGCCTTGACGTTCTCGATGGTATC-GCTAGGCTCAACCTCCAGGGTGATGGTCTT 105441 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||||||||| Sbjct 105440 GCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 >seq16489 Length=130489 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||||||| ||| | ||||||||| || || || Sbjct 52102 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGTTGCTTCCCA 52161 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| |||| || ||||| ||||| || || || || ||||| | || || |||||| Sbjct 52162 GCAAAAATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTG 52221 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| |||||| | | || || |||| |||||||| || || || | ||| Sbjct 52222 ACATTCTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTCAAAGTC 52281 Query 94991 TTCACAAAGATCTGCATGCT 95010 || |||||||||||||| || Sbjct 52282 TTGACAAAGATCTGCATCCT 52301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447921634338360