Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq42356 104 2e-17 seq29144 98.7 9e-16 >seq42356 Length=8389 Score = 104 bits (114), Expect = 2e-17 Identities = 303/456 (66%), Gaps = 17/456 (4%) Strand=Plus/Minus Query 147447 AGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTA 147506 || || || || || || ||| |||| || |||||||| | || || |||| |||| | Sbjct 5463 AGGTGGTGGTTCACGACCTGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAA 5404 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || | | ||||| ||||| ||||| || |||||||| || || | ||| || ||||| Sbjct 5403 GTGTAGGCCTCGATAGACTCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATT 5344 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCA-TTTCTCGCTTAAGCTCGTC 147625 ||| | | ||||||||||||| || ||| | || | |||||| || || | | Sbjct 5343 GGAGCCAGGAGCAATGAATTGCGTAGCCCATGCTTGGCAATTTTCTC-TTTCAGTGCTGC 5285 Query 147626 CCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACA 147685 ||| | ||| || ||| | | || | | | |||||| ||| |||| | || Sbjct 5284 CCAATCCCACAGGTCA---GTTGGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTT 5228 Query 147686 ACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACT 147745 || ||||| || || ||||||| || |||| || | | | ||| ||||| | | Sbjct 5227 GCTGGCAGGACTGCCCTCGTAAGTCTCATATGGACCATACTTCTCAGCAAGTTC-ACAGC 5169 Query 147746 TTGACT-TAGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCT-AGCC 147803 | | || |||||| |||| || || || || | |||| |||| | | | || || Sbjct 5168 TGGCCTCAAGTGCAGCATAGTACATTGTCTCAAATATCTGAATATTGAGA-CGCTGTGCT 5110 Query 147804 TCTTGGCTGTCGTAGGGCATATC----CAAAATGGCGAACGTATCCGCAAGTCCTTGAAT 147859 || | || || | || ||| | |||||| ||| | ||| || || ||||||| Sbjct 5109 TCCTCACTCTCAAATGG-ATAGCGCATCAAAAT---GAATGCATCTGCCAGACCTTGAAC 5054 Query 147860 ACCGATACCGATGGGTCGGTGTCTGAAATTCGATGC 147895 ||| || || ||||| || ||||| | || ||||| Sbjct 5053 ACCAATTCCAATGGGACGATGTCTCATGTTAGATGC 5018 >seq29144 Length=118640 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | |||||||| | ||||| | || | || | | | Sbjct 105183 ATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACGTTGGAGGTTGAGCCTAGC 105242 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| ||||| ||||| || ||||| || || Sbjct 105243 GACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 105302 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | || |||||| || || ||||||| | | | | |||||||| ||| Sbjct 105303 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGAGCGACTACAAC 105362 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || || || |||||||||| || || ||| | || || Sbjct 105363 ATCCAGAAGGAGTCCACGCTCCATCTGGTGCTCAGGCTTCGTGGCGG 105409 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| || | ||||| | || | || | | | Sbjct 104271 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCGAGC 104330 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| ||||| || || || || || || || ||||| Sbjct 104331 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 104390 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || ||||| || |||||||||| | | | | ||||| || ||| Sbjct 104391 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAAC 104450 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || ||||| | |||||||| || || ||| | || || Sbjct 104451 ATCCAGAAGGAGTCTACACTTCATCTGGTGCTCAGGCTTCGTGGCGG 104497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478267796700720