Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq42356 197 4e-45 >seq42356 Length=8389 Score = 197 bits (218), Expect = 4e-45 Identities = 853/1335 (64%), Gaps = 29/1335 (2%) Strand=Plus/Plus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || || || || || || |||||| ||||| ||| | || || ||| || Sbjct 4424 GGAGCCTTCGCAATCTACCTGGAGCCTTGGCATGCGGATGTCTTCAGCTTCCTTTCCCTT 4483 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 || || ||||| || || || ||| |||| || |||||||| |||||||| | ||| | Sbjct 4484 CGCAAGAACACAGGGAAGGAAGAAATGCGAGCTCGTGATCTTTTCTATGCTTTGTGGATC 4543 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 |||| | ||| ||| || |||||||| | | | ||||||||| | |||||| | Sbjct 4544 CCTGATCTTTTCATGCGTCGGGTGGAGGCTGATTCCCAATGGTCACTCATGTGCCCAAAG 4603 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 | |||||||| || || || ||||| || || | || || || ||||| |||||| Sbjct 4604 AAGTGTCCAGGGCTGGAGGAAGTTTGGGGAGAGGAGTTTGAGGCCCTCTACGAGAAGTAT 4663 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 ||| ||||| | ||| ||||| |||| |||| ||| || || Sbjct 4664 GAAAAAGAGGGGCGGTACAACAAGCAGATTCCTGCACGCCAGCTGTGGCGCAGTATTATT 4723 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | ||| | ||||| || || || | ||| | ||||||||| | |||||||||||| Sbjct 4724 GAAGCCCAGGTGGAGACTGGTACTCCATTCATGGTCTACAAAGATGCCTGCAACCGCAAG 4783 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257 |||||||||||| | | ||||| ||| || |||||||| ||||| |||||| || | Sbjct 4784 TCCAACCAGCAGAATGTGGGTACCATTAAGTGCAGCAACCTGTGTACTGAGATTGTTCAG 4843 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 |||| | || | || || | ||| || || || || || || | || || |||| Sbjct 4844 TACAGCTCTGCAGATGAAATTGCTGTGTGCAATCTGGCATCCGTTGCCCTGAACATGTTT 4903 Query 364318 GT---AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCAT---GCT 364371 || |||| || | ||| || | | | | ||| | |||| | Sbjct 4904 GTTCGCCCTGATGCCACCTATGATTTTGAGAAGC--TGCGGCGTGTTGT-TCATGTAGTC 4960 Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCG 364430 || |||| || |||| | || || || || || || ||||||| || || || Sbjct 4961 ACACGCAACCTGAACAAAATCATTGAGGTCAACTACTACCCGGTTCCTGAGGCACGTGC- 5019 Query 364431 TTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACG---TTTT 364487 ||||| ||| | ||||| || ||||| ||||||| || || || || || | | | Sbjct 5020 ATCTAACATGAGACATCGTCCCATTGGAATTGGTGTTCAAGGTCTGGCAGATGCATTCAT 5079 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 | |||||| | | ||||||| || || | ||| |||| |||| || Sbjct 5080 TTTGATGCGCTA---TCCATTTGAGAGTGAGGAAGCACAGCGTCTCAATATTCAGATATT 5136 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 ||| |||||||| | ||| ||| | || ||||| | || | | | || Sbjct 5137 TGAGACAATGTACTATGCTGCACTTGAGGCCAGCTGTGAACTTGCTGAGAAGTATGGTCC 5196 Query 364608 GTACTCTACTTATGAGGG--GTCCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATG 364664 || ||||| ||||| |||| | || |||| | | |||| ||| | || Sbjct 5197 ATATGAGACTTACGAGGGCAGTCCTGCC---AGCAAGGGCAGGCTTCAGTATGACTTGTG 5253 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 | ||| || ||| ||| || ||| | |||| | || || || ||||| Sbjct 5254 GGGTGTGACCCCAACTGACCTGTGGGATTGGGCAGCACTGAAAGAGAAAATTGCCAAGCA 5313 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 ||| ||||| || | | || || |||||||| || || || || ||||| || Sbjct 5314 TGGGCTACGCAATTCATTGCTCCTGGCTCCAATGCCCACAGCATCAACGGCTCAGATTCT 5373 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || ||||| |||| |||| | | || ||| | ||| ||||| ||||| || Sbjct 5374 TGGGAACAATGAGTCTATCGAGGCCTACACTTCTAATGTGTATGTCCGCCGTGTTCTGTC 5433 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 ||| || |||| ||| || || | |||| | || || || | || || || ||||| Sbjct 5434 CGGTGAGTTTCAGGTCGTGAACCACCACCTGCTGAAAGACCTGACTGAGCGAGGTCTGTG 5493 Query 364905 GGG---TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC 364961 | | ||| || | |||||| | ||||| || | | ||| || | || | || Sbjct 5494 GAGCCCTGA-AG--TCAAGAACCAGATCATTGCTGATGGTGGCTCCATTCAACAGATCAA 5550 Query 364962 AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC 365021 || | ||| | || || ||| | | |||||||| || |||||||| || | || Sbjct 5551 GGGGATCCCAAACGACCTAAAGGCATTGTACAAAACGGTGTGGGAAATGTCACAGAAGAC 5610 Query 365022 TCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGT 365081 | | || | ||||| || || |||||||||| || ||||||||||| | ||| | Sbjct 5611 TGTGATGAAGATGGCTGCTGACCGCGGTGCTTACATTGACCAGAGCCAGTCACTGAACAT 5670 Query 365082 ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATC 365141 ||| | ||||| |||| | ||| | ||||||||| | || |||||||| | Sbjct 5671 CCACATTGCACAGCCGACCTATGGGAAGATGTGCTCCATGCATCTGTATGGGTGGAAGGC 5730 Query 365142 CGGTCTTAAGACAGG 365156 ||||| || ||||| Sbjct 5731 TGGTCTGAAAACAGG 5745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302252269873682