Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq29144 105 5e-18 seq16489 104 2e-17 >seq29144 Length=118640 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| ||| || || || ||||| || |||||||||||| | Sbjct 105181 CCGCCCCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 105122 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | |||||||| || || || || | || || ||||| ||||| || Sbjct 105121 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 105062 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || |||||| ||||| | | | ||||||| |||||| Sbjct 105061 ATACCCTCCTTATCCTGGATCTTTGCT--TTCACGTTCTCAATGGTGTCGCTAGGCTCCA 105004 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||| ||||| || || |||||||||||||| || |||||||| Sbjct 105003 CTTCGAGGGTAATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || || |||||||| || |||||||||||| | Sbjct 105865 CCGCCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 105806 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||||| || ||||| || | || || ||||| ||||| || Sbjct 105805 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGG 105746 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || |||||| | | | |||||| ||||| Sbjct 105745 ATCCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTCTCGATGGTGTCGGAAGGCTCGA 105688 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || |||||||| || || || || |||||||| Sbjct 105687 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| ||| |||||||||||||| || |||||||||||| | Sbjct 105409 CCGCCACGAAGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 105350 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | || ||||| || | || || ||||| ||||| ||| Sbjct 105349 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 105290 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | ||||||| ||||| Sbjct 105289 ATTCCTTCCTTGTCCTGGATCTTGGC--CTTAACATTCTCGATGGTGTCGCTAGGCTCAA 105232 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| || || || || || || || ||||| Sbjct 105231 CCTCCAACGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| ||||| |||||||| || || || || || | Sbjct 103955 CCACCACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTC 103896 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||||| || ||||| || | || || ||||| || || || Sbjct 103895 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 103836 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| || || ||| | | |||||| | | | ||||||| ||||| Sbjct 103835 ATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACC 103776 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || ||||| ||||| |||||||||||||| Sbjct 103775 TCAAGCGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 16712 CCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATG 16771 |||| || | ||| |||| || ||||| |||||||| || |||||||||||| || | Sbjct 104180 CCTCTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGG 104121 Query 16772 GTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACG 16831 || | | ||||| | || ||||| || | || || ||||| ||||| || | Sbjct 104120 GTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATC 104061 Query 16832 CCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTT 16889 ||||| || || || || || |||||| | | | || |||| ||||| | Sbjct 104060 CCCTCCTTATCCTGGATCTTGGC--CTTCACATTCTCGATGGTATCGCTAGGCTCAACCT 104003 Query 16890 CCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | | ||||||||| || ||||||| || ||||| || |||||||| Sbjct 104002 CAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||| || ||| | ||||| Sbjct 105622 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCC 105563 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || | ||||| ||||| || | |||||| ||||| Sbjct 105562 TCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC 105503 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | || |||| ||||| |||| |||||||| Sbjct 105502 TGGATCTTGGC--CTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGG 105445 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| || || || |||||||| Sbjct 105444 TCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 >seq16489 Length=130489 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| ||||| || | || || | ||| || || |||||||| || |||||||||||| Sbjct 52071 CCCACCTCGGAGGCGGAGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 52130 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | ||||||| ||| || || ||| |||| || ||||| ||||| || Sbjct 52131 CAGGGTGCGGCCATCCTCCAGTTGCTTCCCAGCAAAAATTAGTCGCTGCTGGTCTGGGGG 52190 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || || || ||| || | | | |||||| || |||| Sbjct 52191 GATCCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCGATAGTGTCCGAGGCCTCC 52248 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || |||| || |||||||| |||||||| Sbjct 52249 ACCTCAAGGGTGATGGTCTTCCCCGTCAAAGTCTTGACAAAGATCTGCAT 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404762399253490