Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq42356 275 8e-69 >seq42356 Length=8389 Score = 275 bits (304), Expect = 8e-69 Identities = 907/1396 (65%), Gaps = 32/1396 (2%) Strand=Plus/Minus Query 61840 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 61899 |||||||| |||||| |||||||| || || || || || | || || ||||| || Sbjct 5803 CTTGTCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCC 5744 Query 61900 CGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 61958 ||||| ||||| || || ||| || || | |||||| | || ||| ||| Sbjct 5743 TGTTTTCAGACC-AGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCG 5685 Query 61959 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62018 | | ||| || ||||| |||| || || || || || ||| | || || | ||| |||| Sbjct 5684 GCTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCAG 5625 Query 62019 CCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62078 |||| || || | ||||| |||| |||||||| | ||||| || | | ||| | | Sbjct 5624 CCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGT 5565 Query 62079 CTTCTGGAAGGT--TTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 | | ||| | ||| | | |||||||| |||||||| || || ||| ||||||| Sbjct 5564 CGTTTGGGATCCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTGA 5505 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195 ||| |||| | || ||| || | || | || || || | || || || | Sbjct 5504 CTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACCT 5445 Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255 |||| || || |||| || | || || | |||| || || | || | ||||| Sbjct 5444 GAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGACT 5385 Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315 |||| || || | ||| ||||| |||||||| || ||||| || |||| | || || Sbjct 5384 CATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAAT 5325 Query 62316 TTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 62373 | | || || ||| | | ||||| ||||| || | | |||||| ||| || || | Sbjct 5324 TGCGTAGCCC--ATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAGT 5267 Query 62374 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 62432 || || || || | || || ||||| | || ||| | | Sbjct 5266 TGGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCT-CGT 5208 Query 62433 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62492 | || || ||||| || | ||||||||| |||||||| || ||||| | |||| | || | Sbjct 5207 AAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGT 5148 Query 62493 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT 62552 | || || || || |||| |||| ||| || |||||| || ||||||||||| Sbjct 5147 ACATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATGGATAGC 5088 Query 62553 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62612 | | ||| || || ||||| | |||||||||||||| || || || | ||||||| Sbjct 5087 GCATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCA 5028 Query 62613 TATTAGAGATTTCA---GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 62669 | ||||| | || || || |||| || || || || | || || ||||| || | Sbjct 5027 TGTTAGA---TGCACGTGCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCA 4971 Query 62670 GATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TCGC-C 62723 | || | |||| ||| | || ||| | ||| || ||||||| | | || Sbjct 4970 GGTTGCGTGTGAC---TACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGTGGCAT 4914 Query 62724 CATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62783 || ||||||||||||| ||||| ||||||||||| || || || | |||| | Sbjct 4913 CAGGGCGAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTG 4854 Query 62784 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 62843 || || || | |||||||| || || || || ||||| ||||| || | ||| | Sbjct 4853 CAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCT 4794 Query 62844 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 62903 | || || ||| ||| || ||||| || || | ||||||||||||||||| || | Sbjct 4793 GCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCA 4734 Query 62904 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 62963 ||| | ||| ||||| ||| | || || || ||||| | | Sbjct 4733 CCTGGGCTTCAATAATACTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACCGCC 4674 Query 62964 TTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAG 63021 ||| |||| || | ||| | | || ||||| ||||||||||| | ||||| Sbjct 4673 CCTCTTTTTCATACTTCTCGTAGAGGGCC--TCAAACTCCTCTCCCCAAACTTCCTCCAG 4616 Query 63022 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63081 || ||||| | | || ||||| | ||||| | ||| ||| ||| || ||| Sbjct 4615 CCCTGGACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCAT 4556 Query 63082 AAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140 || |||||||| ||||| | ||| ||| || ||||| | | || ||| || || | Sbjct 4555 GAAAAGATCAGGGATCCACAAAGC-ATAGAAAAGATCACGAGCTCGCATTTCTTCCTTCC 4497 Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200 |||| ||||| ||| ||||| | | ||| | |||||| || |||| ||| | Sbjct 4496 CTGTGTTCTTGCGAAGGGAAAGGAAGCTGAAGACATCCGCATGCCAAGGCTCCAGGTAGA 4437 Query 63201 TGGCCATAACTCCAGG 63216 | || | ||||||| Sbjct 4436 TTGCGAAGGCTCCAGG 4421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633109641699600