Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq16489 125 6e-24 seq29144 91.5 1e-13 >seq16489 Length=130489 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | || |||||| | || Sbjct 52298 ATGCAGATCTTTGTCAAGACTTTGACGGGGAAGACCATCACCCTTGAGGTGGAGGCCTCG 52239 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| || ||| ||||| || ||||| || || ||||| Sbjct 52238 GACACTATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 52179 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| || || ||| | || |||| ||||| || |||| ||||| Sbjct 52178 CAGCGACTAATTTTTGCTGGGAAGCAACTGGAGGATGGCCGCACCCTGAGCGACTACAAC 52119 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || ||| | ||||| Sbjct 52118 ATCCAGAAGGAGTCGACCCTCCATCTTGTGCT 52087 >seq29144 Length=118640 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || |||| || || |||| || ||||||||||| | Sbjct 104955 ATGCAGATCTTCGTCAAAACGCTGACTGGCAAGACCATTACCCTCGAAGTGGAGCCTAGC 105014 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| |||| ||| ||| || || || || || || || ||||| Sbjct 105015 GACACCATTGAGAACGTGAAAGCAAAGATCCAGGATAAGGAGGGTATCCCCCCAGACCAG 105074 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || || || |||| |||||| || |||| ||||| Sbjct 105075 CAGCGCCTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAAC 105134 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || ||||| || || ||| | ||| | || || Sbjct 105135 ATCCAGAAGGAATCAACTCTCCATCTGGTGTTGAGACT 105172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432979700568065