Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq29122 109 1e-20 >seq29122 Length=91262 Score = 109 bits (120), Expect = 1e-20 Identities = 368/570 (65%), Gaps = 11/570 (2%) Strand=Plus/Plus Query 2956 GAAATCAAGTATTATGGCTATTACCAATGGGTTTTCATCGTATTGTTCATCCAAGCGGTG 3015 || |||||||| | || ||||| ||||| | | |||| | ||| ||||||| || Sbjct 13651 GAGATCAAGTACCACAAGTACTACCAGTGGGTCTGCTTCGTCCTCTTCTTCCAAGCCATG 13710 Query 3016 TTCTTCTCCATTCCGCAGTACATCTGGAAGGTATGTGAAGGAGGGAAAATGAAGACATTG 3075 |||||| ||| || | |||| |||||||| || || ||||| || || |||| || Sbjct 13711 CTCTTCTACATCCCACGGTACCTCTGGAAGACGTGGGAGGGAGGCAAGATCAAGATGCTG 13770 Query 3076 GCTCATGATCTGACTTCACCGTTCCTGAGCAAAGAGTGCATCACAGAGAAGGTGGATCAT 3135 | | || || | | || | | ||| | ||||||| | || | | | | Sbjct 13771 GTGCTGGACCTCAACTGCCCCATAATCAGCGAGGAGTGCAAGAAGGACCGGAAGAAGCTG 13830 Query 3136 TTGATGGATTATTTTTTCATGCAGCTGCACGCGCAAAACTCTTACGCCTACAAATACTTT 3195 ||| | || || || | | |||||| || |||| ||||||| | | ||| Sbjct 13831 TTGGTCGACTACTTCGTGTCCAACCTGCACAACCACAACTTCTACGCCTTCCGGTTCTTC 13890 Query 3196 GGCTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTT 3255 | ||||||||| | ||||| ||||||| |||| |||||| | ||||||| | || Sbjct 13891 GTCTGCGAGCTCTTGAACTTCATCAACGTCGTCGGACAGATCTACTTCATGGACCTGTTC 13950 Query 3256 ATAGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG--GAAGCCG 3313 | || | || || |||||| | | | || | | ||||| | || | | ||| Sbjct 13951 CTGGGAGGCGAGTTCACCACGTACGGCACCGACGTCATATCCTTCACCGAGATGGAACCG 14010 Query 3314 CCCATCCGAACATGACGAACCCCATGAAGCGA--GTCTTTCCAACAATCACTCGATGTAC 3371 ||| | | |||| ||| || | ||||| || | | | || ||| || Sbjct 14011 GAGGACCGTCC-----GGACCCGATG--GCCAAGGTCTTCCCGAAAGTGACCAAATGCAC 14063 Query 3372 TTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCC 3431 || ||||| | |||||| || ||| | || | | | ||| ||||| ||| | | || Sbjct 14064 CTTCCACAAGTTCGGTCCCTCCGGCACGGTGCAGAGGTTCGACGGACTGTGCGTGTTGCC 14123 Query 3432 GGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGC 3491 ||| | |||||||||||||| ||| | |||||||||||||||||| || || Sbjct 14124 CCTCAACATCGTCAACGAGAAGATATACGTCTTCCTCTGGTTCTGGTTCGTGGTCCTCAG 14183 Query 3492 CATCATCAGCGGTATCGTTGTTCTGTACCG 3521 | |||||| |||| ||| | |||||||| Sbjct 14184 CGTCATCACCGGTGTCGCGCTGCTGTACCG 14213 Score = 87.8 bits (96), Expect = 4e-14 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469 |||| | || |||||||| || ||||||||||||||||||||||||||| ||||||| Sbjct 55967 ACGACGTCCTGTGCATCCTTCCTCTGAACGTGGTCAACGAGAAGATCTACATCTTCCTCT 56026 Query 3470 GGTTCTGGTTC 3480 ||||||||||| Sbjct 56027 GGTTCTGGTTC 56037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12470997688500