Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq42356 183 6e-41 seq8136 147 4e-30 >seq42356 Length=8389 Score = 183 bits (202), Expect = 6e-41 Identities = 560/856 (65%), Gaps = 25/856 (3%) Strand=Plus/Minus Query 244298 CCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAG 244357 ||||||| |||| |||| ||| ||||||||| | || ||||||||||| ||| || Sbjct 5256 CCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTCGTAAGTCTCATAT 5197 Query 244358 GGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCG 244417 ||||| | || || || | |||||| | || || || || ||||| || ||||| Sbjct 5196 GGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGTACATTGTCTCA 5137 Query 244418 AAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA-GGTGAAGGGGAT-GCCCATCATCA 244475 || ||| | || | | ||| | ||| || || | || |||| || ||||| | Sbjct 5136 AATATCTGAATATTGA-GACGCTGTGCTT-CCTCACTCTCAAATGGATAGCGCATCAAAA 5079 Query 244476 TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA-G 244534 |||| | || ||||| || || || || || || ||||| | |||| | |||| || | Sbjct 5078 TGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCATGTTAGATG 5019 Query 244535 CGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTG 244594 | | | || || || || ||||| ||||| | || || | ||||| |||||||| ||| Sbjct 5018 CACGT-GCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCAGGTTGCGTGTG 4960 Query 244595 A--TCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGA 244652 | |||| | ||| || |||| || ||| || || | || || | ||||| Sbjct 4959 ACTACATGAACAACACGCCG--CAGCTTCTCAAAATCATA---GGTGGCAT-CAGGGCGA 4906 Query 244653 TGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712 |||||| ||| ||||| ||| ||||| ||||| || || | || | Sbjct 4905 -----------ACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCAT 4857 Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772 | | | ||||||| |||||||| || || ||||| |||||||| ||||| |||| | Sbjct 4856 CTGCAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACAT 4797 Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832 ||| || ||||||||| ||||||||| || ||||||| |||||| || || |||| Sbjct 4796 TCTGCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCT 4737 Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892 | | |||||| | | | ||| ||| || | | || | | | || | Sbjct 4736 CCACCTGGGCTTCAATAATACTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACC 4677 Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTA 244952 |||||| || || ||| |||||||| ||||| ||||| || || || | Sbjct 4676 GCCCCTCTTTTTCATACTTCTCGTAGAGGGCCTCAAACTCCTCTCCCCAAACTTCCTCCA 4617 Query 244953 GGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCA 245012 | || || ||| | ||||||||||| ||| | | | ||| |||| ||| Sbjct 4616 GCCCTGGACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCA 4557 Query 245013 TGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGC 245072 |||| || || |||||||| | || | ||| || || | | | | || ||| | Sbjct 4556 TGAAAAGATCAGGGATCCACAAAGCATAGAAAAGATCACGAGCTCGCATTTCTTCCTTCC 4497 Query 245073 CAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGA 245132 | |||||||| | || | ||| ||||| || | ||||| ||||||| ||||| Sbjct 4496 CTGTGTTCTTGCGAAGGGAAAGGAAGCTGAAGACATCCGCATGCCAAGGCTCCAGGTAGA 4437 Query 245133 CAGCGAGGGCGCCGGG 245148 |||| ||| || || Sbjct 4436 TTGCGAAGGCTCCAGG 4421 >seq8136 Length=40417 Score = 147 bits (162), Expect = 4e-30 Identities = 283/415 (68%), Gaps = 7/415 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| || || || || ||||| ||| | ||| || || |||||||| || || Sbjct 19319 CTGTTCAATGCAATCGAAACCATGCCTTGCGTTAAGCGCAAAGCCGACTGGGCCCTGAAG 19260 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 ||||| | | | | | ||||| | ||| | | | || ||| | || || || Sbjct 19259 TGGATAGCGGATGATCAGTCCACGTTTGCCGAACGTGTAATCGCTTTTGCTGCGGTGGAA 19200 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG--A 42786 ||||| |||||||| || |||||| ||||||||||||| ||| || ||| || | Sbjct 19199 GGCATTTTCTTCTCCGGTAGTTTCGCCGCCATCTTCTGGCTGAAGAAGC--GTGGCGTTA 19142 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| ||||| |||||| ||||| | ||| | |||||||| || || | |||| Sbjct 19141 TGCCTGGACTTACCTTCAGCAACGAGTTGATCTCGCGCGACGAGGGCCTCCACTGCGACT 19082 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGG 42906 ||||||||||| ||||| | || || |||| || ||||| ||| | ||| | Sbjct 19081 TTGCCTGCCTCATGTTC---AAACATCTGGTCAACAAACCGTCGAAAGAGAGAGTCACTG 19025 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966 | || || | || |||||| |||||| |||| || || || || | || |||||| Sbjct 19024 CGATTATTGCCGATGCCGTGACAATCGAGCAGGAATTTCTGACTAAGGCACTACCCGTGG 18965 Query 42967 CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 | || | || |||||| | | |||||| ||||||| ||| || ||||| Sbjct 18964 ACATGATTGGAATGAACTGCCAGCTCATGAAGCAGTACATTGAGTTTGTGGCCGA 18910 Score = 118 bits (130), Expect = 2e-21 Identities = 188/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 42297 GACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGAC 42356 ||||| ||| |||||||||||||||| || ||| |||||||| |||||| | || Sbjct 19687 GACATTTGGGCCATGTACAAGAAGGCAGAGGCGTCCTTCTGGACCGTGGAGGAGGTGGAT 19628 Query 42357 CTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 || ||| ||| | ||||||| ||| || |||| ||| | Sbjct 19627 CTCTCCAGAGACCTGAAGTACTGGGAGAAGCTGAACGACGACGAGCGCCACTTCATATCC 19568 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || ||||||||||||||||| || || || ||||| ||||| |||| | ||| Sbjct 19567 CACGTCCTCGCCTTCTTCGCCGCCTCGGATGGGATCGTCAACGAGAATCTGGTCGAGAGG 19508 Query 42477 TTCATGAAAGAGGTGC-AGT-ACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 ||| | | ||||||| ||| || ||||| |||||||| ||||| |||||| | || | Sbjct 19507 TTCGGGCAGGAGGTGCAAGTGAC--AGAGGCCCGCTGCTTTTACGGGTTCCAGGTCGCTA 19450 Query 42535 TAGAGAACGTGCACTCTGAGGTGTAC 42560 | |||||||| ||||| ||| ||||| Sbjct 19449 TGGAGAACGTCCACTCGGAGATGTAC 19424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943560698567760