Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq29144 141 2e-28 >seq29144 Length=118640 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || ||||| | || ||||| | || ||| || ||||| || |||||| Sbjct 105181 CCGCCCCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 105122 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || ||||||||||| ||||| || |||||| Sbjct 105121 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGG---TCTGGG 105065 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || ||||||||||| || || | ||||| | || Sbjct 105064 GGGATACCCTCCTTATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCC 105005 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || ||||| || |||||||| |||||||| Sbjct 105004 ACTTCGAGGGTAATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| ||||| | || ||||| | || ||| || ||||| || |||||| Sbjct 104725 CCGCCGCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 104666 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || ||||||||||| ||||| || |||||| Sbjct 104665 AGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTG---GTCTGGG 104609 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || ||||| || || |||||||| || || | |||||| | || Sbjct 104608 GGAATGCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCA 104549 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 104548 ACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 288249 ACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAG 288308 ||| | ||||| || || | |||| ||| || || ||||| || |||||| || Sbjct 104181 ACCTCTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAG 104122 Query 288309 CGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGAT 288368 ||||| || || || | || || || ||||||||||| ||||| || |||||| Sbjct 104121 GGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGAT 104062 Query 288369 TCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTC 288428 || || ||||||||||| || || ||||| || || || | |||||| | || || || Sbjct 104061 CCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTC 104002 Query 288429 GAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 104001 AAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | ||| || || ||||||||||| || Sbjct 103955 CCACCACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTC 103896 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || |||||||| |||||||| || ||||||| Sbjct 103895 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTG---ATCTGGG 103839 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || |||||||| || ||||| ||||| || || || | ||||| | || Sbjct 103838 GGAATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCA 103779 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||| ||||| || ||||| || || || || |||||||| Sbjct 103778 ACCTCAAGCGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || || || || ||||||| || || || ||||| || || ||| Sbjct 104497 CCGCCACGAAGCCTGAGCACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTC 104438 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || |||||||| |||||||| ||| |||||| Sbjct 104437 AGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGA---TCTGGG 104381 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || || || ||||| || || | ||||||| || Sbjct 104380 GGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCA 104321 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 104320 ACCTCAAGAGTGATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||| | || || || |||||||| |||||| Sbjct 104953 CCACCACGGAGACGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTC 104894 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || | || Sbjct 104893 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 104834 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || || |||||||| || || | ||||| | || || Sbjct 104833 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACC 104774 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 104773 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || || || || ||||| | |||| || || ||||| || |||||| Sbjct 105409 CCGCCACGAAGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 105350 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || ||||||||||| ||||| || | || Sbjct 105349 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 105290 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || || || || || || || | ||||| | || || Sbjct 105289 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACC 105230 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | |||||| ||||| || || || ||||| ||||| || ||||| Sbjct 105229 TCCAACGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| || ||||| ||||| || | || || || |||||| Sbjct 105829 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 105770 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || |||||| ||||| || |||||||| || || ||||| || Sbjct 105769 ATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 105710 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 105709 TCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 105650 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 105649 AAGATCTGCAT 105639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178657595349778