Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq42356 154 2e-32 >seq42356 Length=8389 Score = 154 bits (170), Expect = 2e-32 Identities = 825/1297 (64%), Gaps = 37/1297 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||||||||| | || | ||||| | ||||| ||||| || || || || | Sbjct 5792 TGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCCTGTTTTCAGAC 5733 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGG-AGAGTGTTGGACTTTCCATG 113683 | |||||| |||||| |||||| ||| ||| ||| | || || || | | ||| Sbjct 5732 CAGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAG-GTCGGCTGTGCAATG 5674 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATG-AAGCGTCCACGATCCGCCGCCATATCAAT 113742 || ||||| ||| || || ||| |||| || || || || ||||| | || Sbjct 5673 TGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCA-CCGCGGTCAGCAGCCATCTTCAT 5615 Query 113743 CACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802 |||| |||| ||||||||||| ||| |||| | ||| | || | |||||| Sbjct 5614 CACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGTCGTTTGGGAT 5555 Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862 || ||| | ||| ||||||||||| | | || | | ||| | || Sbjct 5554 CCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTGACTTCAGGGCT 5495 Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACC 113922 ||| ||||| || | || || | || || || | || || || ||||||||| Sbjct 5494 CCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACCTGAAACTCACC 5435 Query 113923 CGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACC 113982 | || || | | ||| | ||| | ||||| | ||| | |||||||||| || Sbjct 5434 GGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGACTCATTGTT-CC 5376 Query 113983 CAAGATT-TGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041 ||||| | || || || || ||||||||||| || |||| ||| | || || || | Sbjct 5375 CAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAATTGCGTAGCC 5316 Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCC 114099 | | | ||| || || || || |||| || | | | || || | || | Sbjct 5315 CATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAG-TTGGGGTCACA 5257 Query 114100 CTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTA 114159 | ||||| ||| |||| || | || | | ||| || ||||| | ||||| || Sbjct 5256 CC-CCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTCGTAAGTCTCATA 5198 Query 114160 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219 ||| || | ||| || | ||| |||| ||||| || || || | ||||||||||| Sbjct 5197 TGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGTACATTGTCTC 5138 Query 114220 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAA 114278 ||| || || ||| | || || || || ||||| | || ||| ||||| Sbjct 5137 AAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATG-GATAGCGCATCAAAA 5079 Query 114279 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338 | ||| |||| || |||||||| ||||| | ||||| || ||||||||||| ||||| Sbjct 5078 TGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCATGTTAGATG 5019 Query 114339 TTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 114395 || || ||| || || || | || || || | | || || || | Sbjct 5018 CACGTGC---CTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCAGGTTGCGTG 4962 Query 114396 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG- 114454 |||| || | | | ||||| || ||||| | || | ||| | Sbjct 4961 TGACTACATGAACAACACGCCGCAGCTTCTCAAAATCATA------GGTGGCATCAGGGC 4908 Query 114455 --ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||| || | ||||| | || |||||||| ||||||| | ||||| | Sbjct 4907 GAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTGCAGAGC 4848 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 |||||| | ||| || ||||||| || | ||||||||| |||| |||| || | Sbjct 4847 TGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCTGCTGGT 4788 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | ||||| ||| || ||||| ||||| | |||| |||| || || |||||| |||| Sbjct 4787 TGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCACCTGGG 4728 Query 114633 ACTTGAGAATAGCCTTCCAGACATC-GGCG-GCTGGCACAGTGGCGTTGGCTCGCCCCTC 114690 | | |||| || | ||| | |||| || || | |||| |||||||| Sbjct 4727 CTTCAATAATA--CTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACCGCCCCTC 4670 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCC---ACGGCCTCTGAGAGCCC 114747 | || ||||| ||||||||| |||||||| || ||| || |||| ||||| Sbjct 4669 TTTTTCATACTTCTCGTAGAGGGCCTCAAACTCCTCTCCCCAAACTTCCTC---CAGCCC 4613 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 ||| ||| | |||||| | ||| |||||||| | | |||| || || |||||| Sbjct 4612 TGGACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCATGAA 4553 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 || || |||||||| | ||| |||| ||||| ||| Sbjct 4552 AAGATCAGGGATCCACAAAGCATAGAAAAGATCACGA 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596861149159080