Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq42356 156 4e-33 seq29144 116 4e-21 seq8136 104 2e-17 seq16489 95.1 1e-14 >seq42356 Length=8389 Score = 156 bits (172), Expect = 4e-33 Identities = 498/760 (66%), Gaps = 13/760 (2%) Strand=Plus/Minus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 ||||| | | || || ||||| || || |||||||| || | || || || | | | Sbjct 5475 AGGTCTTTCAGCAGGTGGTGGTTCACGACCTGAAACTCACCGGACAGAACACGGCGGACA 5416 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || ||||| |||| | | || | || || || || || || || |||||||| | | Sbjct 5415 TACACATTAGAAGTGTAGGCCTCGATAGACTCATTGTTCCCAAGAATCTGAGCCGTTGAT 5356 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCC 153188 || || ||||| |||| | ||| ||||| || | || ||| ||| | || Sbjct 5355 GCTGTGGGCATTGGAGCCAGGAGCAATGAATTGCGTAGCCCATGCTTGGCAATTTTCTCT 5296 Query 153189 TTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAAC 153248 |||| || |||||||||||| | | || ||| | ||||| ||| ||||| | | Sbjct 5295 TTCAGTGCTGCCCAATCCCACAGGTCAGTTGGGGTCACACCCCACAAGTCATACTGAAGC 5236 Query 153249 ACT--CCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCA 153306 || ||| | ||||| |||||||| | | || || || | | || | Sbjct 5235 -CTGCCCTTG-CTGGCAGGACTGCCCTCGTAAGTCTCATATGGACCATACTTCTCAGCAA 5178 Query 153307 GTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAA 153366 |||| ||||| ||||| || || ||||||| || || || || || |||||||| Sbjct 5177 GTTCACAGCTGGCCTCAAGTGCAGCATAGTACATTGTCTCAAATATCTGAATATTGAGAC 5118 Query 153367 CGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCT 153426 ||||| || ||||| | || ||||| || | || || || |||||||| | Sbjct 5117 GCTGTGCTTCCTCACTCTCAAATGGATAGCGCATCAAAATGAATGCATCTGCCAGACCTT 5058 Query 153427 GGATACCGACGCCGATGGGTCGATGCTTCTCGTT-GCTGCGCCTCGCGCTC-GCTATGGG 153484 | | ||| | || ||||| ||||| || ||| | ||| | | || ||| | | || Sbjct 5057 GAACACCAATTCCAATGGGACGATGTCTCATGTTAGATGCACGT-GC-CTCAGGAACCGG 5000 Query 153485 ATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTAT-CGCCT 153543 |||| ||| || || |||||||| |||||||| || || | | | |||| Sbjct 4999 GTAGTAGTTGACCTCAATGATTTTGTTCAGGTTGCGTGTGACTACATGAACAACACGCCG 4940 Query 153544 TAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAG 153603 | | ||||| ||||||||||| | || ||| || | |||| ||||| | Sbjct 4939 CA-GCTTCTCAAAATCATAGGTGG---CATCAGGGCGAACAAACATGTTCAGGGCAACGG 4884 Query 153604 ACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGA 153663 | |||||||| || || || | || || || ||||||||| || ||||| | || | Sbjct 4883 ATGCCAGATTGCACACAGCAATTTCATCTGCAGAGCTGTACTGAACAATCTCAGTACACA 4824 Query 153664 GGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTT 153723 |||||||||| || ||| |||| ||| ||||| ||| ||||| ||||| || |||| Sbjct 4823 GGTTGCTGCACTTAATGGTACCCACATTCTGCTGGTTGGACTTGCGGTTGCAGGCATCTT 4764 Query 153724 TGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC 153763 || ||| |||| | || || ||||| || || | ||| Sbjct 4763 TGTAGACCATGAATGGAGTACCAGTCTCCACCTGGGCTTC 4724 >seq29144 Length=118640 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | | ||| || | ||| | |||| ||||| || ||||||||||||||| Sbjct 105181 CCGCCCCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 105122 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| | || ||||||| |||| || ||||| ||||| || || Sbjct 105121 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 105062 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| ||| ||| | | || | ||||||| | | |||||| Sbjct 105061 ATACCCTCCTTATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACT 105002 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || |||||||| ||||| || || |||||||| Sbjct 105001 TCGAGGGTAATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || ||||| | | | |||||||| || || |||||||||||| Sbjct 104953 CCACCACGGAGACGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTC 104894 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || || || |||| |||| || ||||| ||||| ||||| Sbjct 104893 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 104834 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| | | ||| ||| Sbjct 104833 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACC 104774 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| || || || || || || ||||| Sbjct 104773 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| |||| || | || | | | |||||||| || |||||||||||||| Sbjct 105866 GCCGCCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 105807 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||| || || || |||| |||| || ||||| ||||| || || Sbjct 105806 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGG 105747 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | |||||||| | ||| || Sbjct 105746 GATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGAC 105687 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || ||||| || || || || |||||||| Sbjct 105686 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | ||| || || | | | |||||||| || ||||||||||||||| Sbjct 105637 CCACCACGCAGGCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 105578 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || || | |||| | |||||| ||||| || || Sbjct 105577 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGG 105518 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||| ||| | | ||| ||| Sbjct 105517 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACC 105458 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||| || || || || |||||||| Sbjct 105457 TCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | | ||| || | ||| | |||| ||||| || ||||||||||||||| Sbjct 104725 CCGCCGCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 104666 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| | || ||||| | |||| || ||||| ||||| || || Sbjct 104665 AGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 104606 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||| ||| | | ||| ||| Sbjct 104605 ATGCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACC 104546 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| || || || || || |||||||| Sbjct 104545 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || | ||| | | |||||||| || || || || || ||| Sbjct 103955 CCACCACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTC 103896 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| |||| |||||||| || || || || Sbjct 103895 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 103836 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| | || | || | | || | ||||||| | | ||| || Sbjct 103835 ATGCCCTCCTTATCC-TGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAAC 103777 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | || || |||||||| ||||| |||||||||||||| Sbjct 103776 CTCAAGCGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || || || || || || |||| Sbjct 105376 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCG 105317 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 105316 AAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACA 105257 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||| | ||| | || || ||||| || || || Sbjct 105256 TTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTGATGGTCTTTCCAGTGAGGGTCTTC 105197 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 105196 ACGAAGATTTGCAT 105183 >seq8136 Length=40417 Score = 104 bits (114), Expect = 2e-17 Identities = 175/252 (69%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACGTGCCGTGCGTT---CGCAAAAAGGCTCAGTGGGCAATG 52361 ||| | ||||| |||| | |||| |||||| |||||| || | ||||| || Sbjct 19319 CTGTTCAATGCAATCGAAACCATGCCTTGCGTTAAGCGCAAA---GCCGACTGGGCCCTG 19263 Query 52362 AAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTC 52421 |||||||| | | || ||||| | ||||| || | | || || || || Sbjct 19262 AAGTGGATAGCGGATGATCAGTCCACGTTTGCCGAACGTGTAATCGCTTTTGCTGCGGTG 19203 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 || ||| | || || ||||| || || ||||||||||| | | || | | ||| | Sbjct 19202 GAAGGCATTTTCTTCTCCGGTAGTTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGCGTT 19143 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 ||||| || || || ||||||||||||||||| ||||||||||| || || ||| ||| Sbjct 19142 ATGCCTGGACTTACCTTCAGCAACGAGTTGATCTCGCGCGACGAGGGCCTCCACTGCGAC 19083 Query 52542 TTTGCGTGCCTC 52553 ||||| |||||| Sbjct 19082 TTTGCCTGCCTC 19071 Score = 96.9 bits (106), Expect = 3e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 52764 AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823 ||||||||||| || ||| | |||| ||||| ||||||||||| ||||||||||||||| Sbjct 18808 AATCCGTTTGACTTCATGGAACACATCTCGCTAGAGGGCAAGACGAACTTTTTCGAGAAG 18749 Query 52824 CGAGTCGGCGAGTATAAG 52841 ||||||||||| ||| || Sbjct 18748 CGAGTCGGCGAATATCAG 18731 >seq16489 Length=130489 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | || | || | ||| | | | |||||||| || ||||||||||||||| Sbjct 52072 CCACCTCGGAGGCGGAGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 52131 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| ||||| || || | | | ||||| ||||| ||||| || || Sbjct 52132 AGGGTGCGGCCATCCTCCAGTTGCTTCCCAGCAAAAATTAGTCGCTGCTGGTCTGGGGGG 52191 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||| | | ||||||| Sbjct 52192 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCCGAGGCCTCCACC 52251 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| ||| || ||||| |||||||| Sbjct 52252 TCAAGGGTGATGGTCTTCCCCGTCAAAGTCTTGACAAAGATCTGCAT 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495853287480720