Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq29144 118 8e-22 >seq29144 Length=118640 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | ||| || |||||||| || || || || |||||||| ||||| Sbjct 105637 CCACCACGCAGGCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 105578 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||||||| | ||||||||||| |||||| ||| Sbjct 105577 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGG 105518 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || || ||||||||| || || Sbjct 105517 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACC 105458 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || || ||||| || || || || || |||||| Sbjct 105457 TCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCATA 105410 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || |||||||| ||||| || | | | ||||| | || Sbjct 105386 ATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGCTG 105327 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||| ||| | |||| ||||| ||||| ||||||||||||||||| || || Sbjct 105326 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTT 105267 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || |||||| || || || || || ||||| || || || Sbjct 105266 GGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTGATGGTCTTTCCAGT 105207 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||||||| Sbjct 105206 GAGGGTCTTCACGAAGATTTGCATA 105182 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || || || || || ||||| ||||| ||| | | | || || Sbjct 104935 ACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCCTCC 104876 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | |||| ||||| ||||| ||||||||||||||||| Sbjct 104875 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 104816 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || || | || || || |||||| || || || | || ||||| || Sbjct 104815 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGATGGTCTTG 104756 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || || ||||||||| Sbjct 104755 CCAGTGAGGGTCTTCACGAAGATTTGCATA 104726 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || || | ||| || || | ||| || || || || || || |||||||| ||||| Sbjct 104725 CCGCCGCGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTC 104666 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | || || || || || |||||| | |||| ||||| ||||| ||| Sbjct 104665 AGAGTGCGGCCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 104606 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || || || || | || || ||||||||| || || Sbjct 104605 ATGCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACC 104546 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || ||||| || || || || || || || || || |||||| Sbjct 104545 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATA 104498 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| ||||| || | | |||| || | || Sbjct 105841 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGC 105782 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| ||||| ||||| ||| || ||||||||||| || ||| Sbjct 105781 TTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTTG 105722 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| | || || || | ||| ||||| || || ||| Sbjct 105721 GCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTC 105662 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || |||||| Sbjct 105661 AGGGTCTTCACGAAGATCTGCATA 105638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357104736240035