Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq42356 161 1e-34 >seq42356 Length=8389 Score = 161 bits (178), Expect = 1e-34 Identities = 824/1294 (64%), Gaps = 31/1294 (2%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||||||||| | || | ||||| | ||||| ||||| || || || || | Sbjct 5792 TGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCCTGTTTTCAGAC 5733 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGG-AGAGTGTTGGACTTTCCATG 115644 | |||||| |||||| |||||| ||| ||| ||| | || || || | | ||| Sbjct 5732 CAGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAG-GTCGGCTGTGCAATG 5674 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAAT 115703 || ||||| ||| || || ||| |||| || || || || ||||| | || Sbjct 5673 TGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCA-CCGCGGTCAGCAGCCATCTTCAT 5615 Query 115704 CACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 115763 |||| |||| ||||||||||| ||| |||| | ||| | || | |||||| Sbjct 5614 CACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGTCGTTTGGGAT 5555 Query 115764 ATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGA 115823 || ||| | ||| || |||||||| | | || | | ||| | || Sbjct 5554 CCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTGACTTCAGGGCT 5495 Query 115824 CCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACC 115883 ||| ||||| || | || || | || ||||| | || || || ||||||||| Sbjct 5494 CCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACCTGAAACTCACC 5435 Query 115884 CGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACC 115943 | || || | | ||| | || | ||||| | ||| | |||||||||| || Sbjct 5434 GGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGACTCATTGTT-CC 5376 Query 115944 CAAGATT-TGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGAC 116002 ||||| | || || || || ||||||||||| || |||| ||| | ||||| || | Sbjct 5375 CAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAATTGCGTAGCC 5316 Query 116003 CCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCC 116060 | | ||| || || || || |||| || | | | || || | || | Sbjct 5315 CATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAG-TTGGGGTCACA 5257 Query 116061 CTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 116120 | |||||| ||| |||| || | || | | || || ||||| | |||||||| Sbjct 5256 C-CCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTCGTAAGTCTCATA 5198 Query 116121 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 116180 ||| || | ||| || | ||| |||| ||||| || || || | ||||||||||| Sbjct 5197 TGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGTACATTGTCTC 5138 Query 116181 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAA 116239 ||| || || ||| | || || || || ||||| | || | ||| ||||| Sbjct 5137 AAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATG-GATAGCGCATCAAAA 5079 Query 116240 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 116299 | ||| |||| || |||||||| ||||| | ||||| || ||||||||||| ||||| Sbjct 5078 TGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCATGTTAGATG 5019 Query 116300 TTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 116356 || || ||| || || || | || || || | | || || || | Sbjct 5018 CACGTGC---CTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCAGGTTGCGTG 4962 Query 116357 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG- 116415 |||| || | | | ||||| || ||||| | || | ||| | Sbjct 4961 TGACTACATGAACAACACGCCGCAGCTTCTCAAAATCATA------GGTGGCATCAGGGC 4908 Query 116416 --ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 116473 ||| || | ||||| | || |||||||| ||||||| | ||||| | Sbjct 4907 GAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTGCAGAGC 4848 Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533 |||||| | ||| || ||||||| || | ||||||||| |||| |||| || | Sbjct 4847 TGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCTGCTGGT 4788 Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593 | ||||| ||| || ||||| ||||||| ||| |||| || || |||||| |||| Sbjct 4787 TGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCACCTGGG 4728 Query 116594 ACTTGAGAATAGCCTTCCATACATC-GGCG-GCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651 | | |||| || | ||| | |||| || || | |||| |||||||| Sbjct 4727 CTTCAATAATA--CTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACCGCCCCTC 4670 Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGG 116711 | || ||||| |||||||||||||||||| || ||| | | || |||||||| Sbjct 4669 TTTTTCATACTTCTCGTAGAGGGCCTCAAACTCCTCTCCCCAAACTTCCTCCAGCCCTGG 4610 Query 116712 TGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 116771 ||| | ||| || | ||| |||||||| | | |||| ||||| |||||| || Sbjct 4609 ACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCATGAAAAG 4550 Query 116772 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 116805 || |||||||| | || |||| ||||| ||| Sbjct 4549 ATCAGGGATCCACAAAGCATAGAAAAGATCACGA 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613001432333160