Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq42356 183 5e-41 seq8136 109 9e-19 >seq42356 Length=8389 Score = 183 bits (202), Expect = 5e-41 Identities = 460/687 (67%), Gaps = 18/687 (3%) Strand=Plus/Minus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 |||||||||| ||||||||||||| || | |||||| | | ||||| || ||||||| Sbjct 5804 TCTTGTCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGC 5745 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | || || || || || |||||| |||| |||||||| ||| || | | | | Sbjct 5744 CTGTTTTCAGACCAGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCG 5685 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | | || ||||| |||||||| |||||||| ||||| ||| ||| | || || || | Sbjct 5684 GCTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCAG 5625 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAAC-ACGTCTCTGGTG 204076 |||| || || | |||||||| || || ||||||||||| ||| || | | || | | Sbjct 5624 CCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGT 5565 Query 204077 TGTTGAGGCACATCTTCCCACGTCCTG----ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132 ||| || ||| ||| | ||| || ||||| || || || | ||| | Sbjct 5564 CGTTTGGG---ATC--CCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGA-TCTGGT 5511 Query 204133 CCTCGTC-TCCTCCCCCCACATGCCCAACCTGA-TCAGCTCCCGCACCAGGTGGGGGTTG 204190 || | | || | ||||| | || || | |||| || || ||||||| |||| Sbjct 5510 TCTTGACTTCAGGGCTCCACA-GACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTC 5452 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | || |||||| || |||||||| || | ||| ||| || ||| | | ||| Sbjct 5451 ACGACCTGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCG 5392 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 | | ||| ||||| || | ||||||||| || || |||||||| |||||||||||| Sbjct 5391 ATAGACTCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGC 5332 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGG-ACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCA 204368 | || ||||| | || || |||| | | | | ||||| | | ||| || || Sbjct 5331 AATGAATTGCGTAGCCC--ATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACA 5274 Query 204369 TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGC 204428 || | || |||| ||||||| ||| |||||| |||| | ||| | || |||| Sbjct 5273 GGTCAGTTGGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGC 5214 Query 204429 CCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGT 204488 ||| ||| ||| ||| || || || || || || | || ||| | | || Sbjct 5213 CCTCGTAAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAG 5154 Query 204489 GATAGTACATGGTCTCAAAGATCTGAA 204515 ||||||||| |||||||| ||||||| Sbjct 5153 CATAGTACATTGTCTCAAATATCTGAA 5127 >seq8136 Length=40417 Score = 109 bits (120), Expect = 9e-19 Identities = 217/318 (68%), Gaps = 9/318 (3%) Strand=Plus/Plus Query 159751 CCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCC 159809 ||| || |||||||| || ||||| || | ||| ||| ||||| || || | || Sbjct 18906 CCTATCGGCCACAAACTCAATGTA-CTGCTTCATGAGCTGGCAGTTCATTCCAATCATGT 18964 Query 159810 TAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCT 159869 ||||| || || | | |||||| |||| ||| || || || |||| | |||| Sbjct 18965 CCACGGGTAGTGCCTTAGTCAGAAATTCCTGCTCGATTGTCACGGCATCGGCAATAATCG 19024 Query 159870 GCGAGACACGTTCGTACCCCGGCTTGCCCA--AAATGTGGTCCTTAAACAGGAGGCACGC 159927 | ||| | || | | ||| ||| | | |||| || |||| |||||| || Sbjct 19025 CAGTGACTCTCTCTTTCGACGGTTTGTTGACCAGATGT-----TTGAACATGAGGCAGGC 19079 Query 159928 AAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGG 159987 |||||||||||| || |||||||| || ||||| ||||||||| | | | || || || Sbjct 19080 AAAGTCGCAGTGGAGGCCCTCGTCGCGCGAGATCAACTCGTTGCTGAAGGTAAGTCCAGG 19139 Query 159988 CATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCC 160047 ||| | |||||| || ||||| || ||||| || ||| |||| || || || || Sbjct 19140 CATAACGCCACGCTTCTTCAGCCAGAAGATGGCGGCGAAACTACCGGAGAAGAAAATGCC 19199 Query 160048 CTCCACGGCCGCAAACGC 160065 ||||| || ||||| || Sbjct 19200 TTCCACCGCAGCAAAAGC 19217 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342 ||||||||||| |||||| | ||||||| | || || | ||| || | ||| || Sbjct 19491 TGCACCTCCTGCCCGAACCTCTCGACCAGATTCTCGTTGACGATCCCATCCGAGGCGGCG 19550 Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402 ||||| || | ||||| || ||||| || | |||||| | ||| || ||| |||||| Sbjct 19551 AAGAAGGCGAGGACGTGGGATATGAAGTGGCGCTCGTCGTCGTTCAG---CTTCTCCCAG 19607 Query 160403 TGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTT 160462 | ||| |||| || | ||| ||||| ||| || |||| || |||| || | Sbjct 19608 TACTTCAGGTCTCTGGAGAGATCCACCTCCTCCACGGTCCAGAAGGACGCCTCTGCCTTC 19667 Query 160463 TTGTACATGGCCCAGATGGCGTGCTCTCTGATCGGAAA 160500 |||||||||||||| ||| || | | | |||| || || Sbjct 19668 TTGTACATGGCCCAAATGTCGGGGTATTTGATGGGGAA 19705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794499683992560