Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq29144 149 7e-31 seq16489 100 3e-16 >seq29144 Length=118640 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || || || |||| || ||||||||||| ||||| Sbjct 105602 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 105543 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||||| || | || |||||||||| |||||| ||||| | Sbjct 105542 GATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 105483 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| | || || |||| |||||||| ||||| |||||||| ||||| Sbjct 105482 CTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTAAC 105423 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 105422 GAAGATCTGCAT 105411 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||| ||||| || |||||| ||||||||||||||| |||||||| | Sbjct 104942 ACGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCC 104883 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| |||| |||||||||||| | || | | ||||| Sbjct 104882 ATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTT 104823 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||||| | || || || | ||||| Sbjct 104822 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGAT 104763 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || ||||||||||| Sbjct 104762 GGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | |||| |||||| ||||| ||||| ||| || ||||| | || || Sbjct 104480 CACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTC 104421 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| ||||| || | |||||||| || | || | || |||||| ||| Sbjct 104420 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTG 104361 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | |||||||||| || || || | |||||||| || Sbjct 104360 GATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACCTCAAGAGTGATGGTCTT 104301 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||| || ||||| ||||| ||||| Sbjct 104300 GCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 136 bits (150), Expect = 4e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||||||| | || ||||| ||||| ||||||||| |||||||| | || Sbjct 105167 CAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATC 105108 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | |||||| |||||||| |||| |||||||||||| | || | | |||||| || Sbjct 105107 CTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATC 105048 Query 46501 CATGATCTTCTTCTTGAGCGT-CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 | |||||| | ||| ||| | | | |||||||| | ||||| || | || |||| Sbjct 105047 CTGGATCTT-TGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACTTCGAGGGTAATGG 104989 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| ||||||||||| || ||||| ||||| Sbjct 104988 TCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| ||||| ||||||||| || ||||| | || || Sbjct 105392 CACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTC 105333 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| |||||||||||| | || | | ||||||||| Sbjct 105332 AAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTG 105273 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | || | | |||||||| | || || |||| ||||||||| || Sbjct 105272 GATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTGATGGTCTT 105213 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||||||||| Sbjct 105212 TCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||||||| | || |||||| |||||||| || || || ||||| | Sbjct 103944 ACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTCAGCGTGCGGCC 103885 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | |||||||| || | || | || |||||| Sbjct 103884 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTT 103825 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||| | || | | |||||||| | || || || | |||||| Sbjct 103824 ATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACCTCAAGCGTGAT 103765 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCA 46599 ||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct 103764 GGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATACTGCA 103723 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| || | || |||||| ||||| ||||||||| || ||||| || Sbjct 105853 CGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCG 105794 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||||||||| |||| |||||||||||| | || | | |||||| Sbjct 105793 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTG 105734 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | || | | |||||| | || || |||| |||||| Sbjct 105733 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATG 105674 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| ||||| || || || ||||| ||||| Sbjct 105673 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 116 bits (128), Expect = 4e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 46370 CCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGA 46429 ||||| | |||| ||||| || | || |||||| ||||| ||||||||| || Sbjct 104180 CCTCTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGG 104121 Query 46430 GTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACG 46489 ||||| | || || ||||||||||| ||||| |||| |||||||||||| | || | Sbjct 104120 GTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATC 104061 Query 46490 CTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCC 46549 | |||||| ||| |||||| ||| | || | | || ||||| | || || || Sbjct 104060 CCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTCA 104001 Query 46550 ACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| |||| || || || ||||| ||||| Sbjct 104000 AGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||||||| | || ||||| ||||| ||||||||| |||||||| | || Sbjct 104711 CAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATC 104652 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | |||||| || ||||| |||| |||||||||||| | || | || |||||||| Sbjct 104651 CTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 104592 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | || | | || ||||| | || || || | |||||||| Sbjct 104591 TTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGAGTGATGGT 104532 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 104531 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 >seq16489 Length=130489 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| ||||| | || |||||| ||||| ||||||||| || ||||| | || || Sbjct 52089 CACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTC 52148 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 || ||||| || || || || | ||||||||||| | || | | |||||||||| Sbjct 52149 CAGTTGCTTCCCAGCAAAAATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTG 52208 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | ||||| || | |||||||| || Sbjct 52209 GATCTTGGCCTTGACATTCTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTCTT 52268 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || || |||||||| ||||| Sbjct 52269 CCCCGTCAAAGTCTTGACAAAGATCTGCAT 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564772424528520