Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8136 239 4e-58 seq29144 154 1e-32 seq16489 118 1e-21 >seq8136 Length=40417 Score = 239 bits (264), Expect = 4e-58 Identities = 245/320 (77%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 ||||| |||||||| ||||||||||| |||| || || ||||||||||| || ||||| Sbjct 19425 TACATCTCCGAGTGGACGTTCTCCATAGCGACCTGGAACCCGTAAAAGCAGCGGGCCTCT 19484 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 ||| ||||| || || |||| | |||||||||||| ||||||||||| || || | Sbjct 19485 GTCACTTGCACCTCCTGCCCGAACCTCTCGACCAGATTCTCGTTGACGATCCCATCCGAG 19544 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368 |||||||| ||||| || ||||| ||||| |||||||||| |||||||| |||| Sbjct 19545 GCGGCGAAGAAGGCGAGGACGTGGGATATGAAGTGGCGCTCGTCGTCGTTCAGCTTCTCC 19604 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 |||| | ||| |||| || ||||||||||| |||||||| || |||||||| || Sbjct 19605 CAGTACTTCAGGTCTCTGGAGAGATCCACCTCCTCCACGGTCCAGAAGGACGCCTCTGCC 19664 Query 133429 TTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGG 133488 || |||||||| ||| ||||| | |||| ||||| || | |||||| |||| || Sbjct 19665 TTCTTGTACATGGCCCAAATGTCGGGGTATTTGATGGGGAAGACCACAAATCGGCCTGGA 19724 Query 133489 TTTTCGCGCAACAGCGGCTC 133508 || || |||| || ||||| Sbjct 19725 TTCTCTCGCAGAAGGGGCTC 19744 Score = 167 bits (184), Expect = 2e-36 Identities = 296/429 (69%), Gaps = 2/429 (0%) Strand=Plus/Plus Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| ||||| | ||||| |||||||| ||||| ||||| ||| |||| | ||| || Sbjct 18891 CAGTTCGACCAAAAGCCTATCGGCCACAAACTCAATGTACTGCTTCATGAGCTGGCAGTT 18950 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | ||| | || ||| || || || | || ||||| |||||||| | || || Sbjct 18951 CATTCCAATCATGTCCACGGGTAGTGCCTTAGTCAGAAATTCCTGCTCGATTGTCACGGC 19010 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCC-GTTGCACCAAATGCTTGAACA 132889 |||| | || | | || | | | ||| |||| |||| ||| ||||||| Sbjct 19011 ATCGGCAATAATCGCAGTGACTCTCTCTTTCGACGGTTTGTTG-ACCAGATGTTTGAACA 19069 Query 132890 TCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAG 132949 | | ||| ||||||||||| || | ||||||||| | || || | ||||||||||| | Sbjct 19070 TGAGGCAGGCAAAGTCGCAGTGGAGGCCCTCGTCGCGCGAGATCAACTCGTTGCTGAAGG 19129 Query 132950 TCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAA 133009 | | || ||||| | ||| || || || ||||| || |||||||||||||| || || | Sbjct 19130 TAAGTCCAGGCATAACGCCACGCTTCTTCAGCCAGAAGATGGCGGCGAAACTACCGGAGA 19189 Query 133010 AGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGC 133069 |||| | ||| || || || || ||||| | | || ||| | ||||||| | | Sbjct 19190 AGAAAATGCCTTCCACCGCAGCAAAAGCGATTACACGTTCGGCAAACGTGGACTGATCAT 19249 Query 133070 TGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGG 133129 || ||||| ||| ||||| ||||| || || ||||| ||||| |||||||| | Sbjct 19250 CCGCTATCCACTTCAGGGCCCAGTCGGCTTTGCGCTTAACGCAAGGCATGGTTTCGATTG 19309 Query 133130 CGTTCAACA 133138 | || |||| Sbjct 19310 CATTGAACA 19318 >seq29144 Length=118640 Score = 154 bits (170), Expect = 1e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| |||||||| |||| || ||| | | | Sbjct 104727 ATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104786 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || |||||||| | ||||| Sbjct 104787 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCA 104845 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| || | ||||| || | ||||||||| Sbjct 104846 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAA 104905 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| ||||||||||| |||||| Sbjct 104906 TATCCAGAAGGAGTCGACCCTGCATTTGGTCCTGCGT 104942 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || |||||| | || Sbjct 105639 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCTTCC 105698 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || || || | ||||| Sbjct 105699 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGACCAG 105758 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| |||| |||||||| | |||||||||| Sbjct 105759 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAAC 105818 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| ||||| |||| || || |||||||||| || | ||||||| Sbjct 105819 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTGCGCCTGCGTGGCGGCC 105867 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| |||||||| || ||||| ||||| ||| |||| || ||| | | | Sbjct 104955 ATGCAGATCTTCGTCAAAACGCTGACTGGCAAGACCATTACCCTCGAAGTGGAGCCTAGC 105014 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| ||| |||| || || ||||| || ||| | ||||| Sbjct 105015 GACACCATTGAGAACG-TGAAAGCAAAGATCCAGGATAAGGAGGGTATCCCCCCAGACCA 105073 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||| |||| || | ||||| || | ||||||||| Sbjct 105074 GCAGCGCCTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAA 105133 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||||| |||||| | || || ||| ||||| || Sbjct 105134 CATCCAGAAGGAATCAACTCTCCATCTGGTGTTG 105167 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || |||||||| | || || ||| | | | Sbjct 105183 ATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACGTTGGAGGTTGAGCCTAGC 105242 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | || |||| ||||| || |||||||| | ||||| Sbjct 105243 GACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 105302 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | |||||||| | |||||||||| Sbjct 105303 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGAGCGACTACAAC 105362 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| ||||| | ||||| ||| ||||||| Sbjct 105363 ATCCAGAAGGAGTCCACGCTCCATCTGGTGCT 105394 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| ||||||||| | || || ||| | | | Sbjct 105411 ATGCAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCTAGC 105470 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 105471 GATACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCCGACCA 105529 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || |||| || ||||| | ||||||||| Sbjct 105530 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGAGCGACTACAA 105589 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || ||||| || || Sbjct 105590 CATCCAGAAGGAGTCGACCCTTCACTTGGTTCTTCG 105625 Score = 129 bits (142), Expect = 6e-25 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| ||||||||| | || || ||| | | | Sbjct 103957 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGCCTAGC 104016 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || |||| || || ||||| || || | ||||| Sbjct 104017 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCAGACCAG 104076 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | |||||||| | |||||||||| Sbjct 104077 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAAC 104136 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGG 38467 ||||| ||||| ||||||| || ||||||||||| | ||||| Sbjct 104137 ATCCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGACTCAGAGG 104180 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | | Sbjct 104499 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104558 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 104559 GATACCATTGAGAACG-TGAAGGCTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 104617 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||| |||| || | ||||| || | ||||||||| Sbjct 104618 GCAGCGCCTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAA 104677 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||||| |||||| | || || ||| ||||| || Sbjct 104678 CATCCAGAAGGAATCAACTCTCCATCTGGTGTTG 104711 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || ||||| |||||||| | || || ||| | | | Sbjct 103729 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAGACCATCACGCTTGAGGTTGAGCCTAGC 103788 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | || || ||||| |||||| | || || Sbjct 103789 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 103848 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| |||||||| || | ||||| || | || || || Sbjct 103849 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGTGATTATAAT 103908 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||||||| ||| ||||||||||| || | || || Sbjct 103909 ATCCAGAAGGAGTCGACGCTCCATCTGGTGCTGCGTCTGCGTGGTGG 103955 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| |||||||| | || || ||| | | | Sbjct 104271 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCGAGC 104330 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| || || ||||| |||||| | || || Sbjct 104331 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCA 104389 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || || | |||||||| | ||| ||||| Sbjct 104390 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAA 104449 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || ||| ||||||| Sbjct 104450 CATCCAGAAGGAGTCTACACTTCATCTGGTGCT 104482 >seq16489 Length=130489 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | ||||| || ||||||||| | || || |||||| | Sbjct 52298 ATGCAGATCTTTGTCAAGACTTTGACGGGGAAGACCATCACCCTTGAGGTGGAGGCCTCG 52239 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 52238 GACACTATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 52179 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || || || || ||||| || | |||||||| | |||||||||| Sbjct 52178 CAGCGACTAATTTTTGCTGGGAAGCAACTGGAGGATGGCCGCACCCTGAGCGACTACAAC 52119 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| |||| || ||| | ||||| || Sbjct 52118 ATCCAGAAGGAGTCGACCCTCCATCTTGTGCTCCG 52084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499760463795840