Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq45058 127 8e-24 seq44505 123 1e-22 seq37670 89.7 2e-12 seq11869 89.7 2e-12 seq29144 84.2 9e-11 >seq45058 Length=7942 Score = 127 bits (140), Expect = 8e-24 Identities = 183/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 451192 AGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGA 451251 ||| |||||| | || ||||| |||||||||| || || || || || |||||||| Sbjct 2138 AGGGAAGCCCAAAATCCAAGTGGATTATAAAGGAGAGACCAAGACATTCTACCCTGAAGA 2197 Query 451252 AATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCC 451311 ||| || |||||||| || || ||||| ||||| || || || | || Sbjct 2198 AATCAGTTCCATGGTTCTAACGAAGATGAAGGAAACTGCCGAGGCCTACCTGGGGAAGGT 2257 Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 || || ||||| || || |||||||| || || ||||||||| | || || || || || Sbjct 2258 GGTGACAGATGCCGTCATCACTGTTCCAGCCTACTTCAATGATTCCCAGCGACAGGCTAC 2317 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||| ||||| || ||||| | ||||| || ||||| || ||||| || ||||| Sbjct 2318 CAAAGACGCAGGGACCATCGCTGGCCTCAATGTCCTGCGAATCATCAATGAGCCAACAGC 2377 Query 451432 AGCTGCTCTAGCATATGG 451449 ||| || | || ||||| Sbjct 2378 AGCCGCCATTGCCTATGG 2395 Score = 120 bits (132), Expect = 1e-21 Identities = 295/443 (67%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 451982 AAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041 |||||| | || || ||||||||||||||||||||||| ||||| || ||||| || || Sbjct 3247 AAGAGCATCAACCCAGATGAAGCTGTTGCATATGGTGCAGCAGTACAGGCAGCCATCCTG 3306 Query 452042 ACAGGTT-CAGATGATGAAAAATT--AGGAGATATTCTGTTAGTAGATGTAACACCTCTA 452098 || || || | || | | |||| | || ||| | ||||||||||| || Sbjct 3307 CATGGCGACAAATCA-GAGGAGGTGCAGGACTTGTT--GTTGCTGGATGTAACACCACTG 3363 Query 452099 TCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCT 452158 || || ||| ||||||| || ||||| ||||||| | | || || || ||| | Sbjct 3364 TCACTAGGAATTGAAACTGCAGGTGGGGTGATGACCACCCTGATCAAGCGCAACACTACC 3423 Query 452159 ATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACT 452218 || || || ||| || ||||| | ||| || ||||| || || || Sbjct 3424 ATCCCAACCAAGCAGACCCAGACATTCACCACATACTCGGACAACCAGCCTGGAGTGCTG 3483 Query 452219 ATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT 452278 |||||||| | || || || || |||||||| || ||||| || ||| | ||| Sbjct 3484 ATTCAAGTTTACGAGGGCGAGCGAGCAATGACCAAGGACAATAACCTTCTTGGAAAGTTT 3543 Query 452279 ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGAT 452338 || | ||||||||| || | || ||| || ||||| |||| | ||| Sbjct 3544 GAGCTGACTGGAATTCCTCCTGCCCCCCGTGGTGTTCCCCAGATTGAGGTTACTTTTGAC 3603 Query 452339 GTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA 452398 ||||||| |||||||| || ||||||| ||| |||| || || ||||||| | | Sbjct 3604 ATTGATGCCAATGGTATCCTAAATGTGACTGCCATTGAGAAGTCCACTGGAAAGGAAAAC 3663 Query 452399 AAAATTACAATTACTAATGATAA 452421 || || || || || ||||| || Sbjct 3664 AAGATCACCATCACAAATGACAA 3686 >seq44505 Length=13134 Score = 123 bits (136), Expect = 1e-22 Identities = 184/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || |||||| | || ||||| |||||||||| || || || || || |||||||||| Sbjct 9789 GGGAAGCCCAAAATCCAAGTGGATTATAAAGGAGAGACCAAGACATTCTATCCTGAAGAA 9730 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||||| | || ||||| ||||| || || || | || Sbjct 9729 ATCAGTTCCATGGTTCTGATGAAGATGAAGGAAACTGCTGAGGCCTACCTGGGGAAGGTG 9670 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | ||||| || ||||| ||||| |||| || |||||| | || || || || || Sbjct 9669 GTGATGGATGCCGTCATTACAGTTCCAGCTTCCTTTAATGATTCCCAGCGACAGGCTACC 9610 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||||||||| || ||||| | ||||| || ||||| || ||||| || |||||| Sbjct 9609 AAAGATGCAGGGACCATCGCTGGCCTCAATGTCCTGCGAATCATCAATGAGCCAACAGCA 9550 Query 451433 GCTGCTCTAGCATATGGACTA 451453 || || | || |||||| || Sbjct 9549 GCGGCCATTGCGTATGGATTA 9529 >seq37670 Length=126883 Score = 89.7 bits (98), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || || || ||||| | || || || || || ||||| || || || | ||||| || Sbjct 34711 GTGACCGACGCAGTGGTGACAGTACCTGCATACTTCAACGACGCTCAGAGACAAGCGACC 34652 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||| ||||| | || |||||| | || || || || || || || |||||||||||| Sbjct 34651 AAAGACGCAGGGAAAATCGCTGGTCTGAACGTACTCCGGATAATCAACGAACCTACAGCA 34592 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || |||||| | |||||| || | |||||||| | ||| | || || Sbjct 34591 GCAGCCATTGCTTATGGA-TTGGAAAA--CAATGCGACAGAAGATAGAAACGTGTTGGTG 34535 Query 451493 TTTGATTTTGGTGGAGGAAC 451512 | || | || |||||||| Sbjct 34534 TACGACCTCGGAGGAGGAAC 34515 >seq11869 Length=83137 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || |||||||| |||||||| || | || ||||| || || ||||| | | Sbjct 64170 CCAGAAGAAATCAGCTCTATGGTGCTGGCCAAGATGAAGGAGACGGCAGAGGCTTTCCTG 64229 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| || ||||||||||| || || || || || || || ||||| | ||||| Sbjct 64230 GGTCAGAGGGTCACTGATGCAGTCATCACAGTCCCAGCCTACTTTAATGACTCTCAACGT 64289 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || ||||||||||| || ||||| | || || || || || || ||||| Sbjct 64290 CAGGCCACCAAAGATGCAGGGATCATCGCTGGGCTGAACGTCCTCCGCATCATCAATGAG 64349 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452 |||||||| || || || || ||||| || Sbjct 64350 CCTACAGCCGCAGCCCTTGCCTATGGGCT 64378 >seq29144 Length=118640 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| |||||||| || || || || ||||| ||||| | Sbjct 103729 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAGACCATCACGCTTGAGGTTGAGCCTAGC 103788 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| |||||||| || ||||| || ||||| Sbjct 103789 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 103848 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || ||||| | || || ||||||||| Sbjct 103849 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGTGATTATAAT 103908 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 103909 ATCCAGAAGGA 103919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974048923508708