Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq42356 149 8e-31 seq16828 87.8 2e-12 seq1046 82.4 9e-11 >seq42356 Length=8389 Score = 149 bits (164), Expect = 8e-31 Identities = 858/1349 (64%), Gaps = 41/1349 (3%) Strand=Plus/Plus Query 112000 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 112059 ||||| |||| || ||||| ||||| |||||| || | |||||| | || | Sbjct 4431 TCGCAATCTACCTGGAGCCTTGGCATGCGGATGTCTTCAGCTTCCTTTCCCTTCGCAAGA 4490 Query 112060 ACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 112119 || ||| | || || ||| || ||||| |||| ||| | ||||| || |||| Sbjct 4491 ACACAGGGAAGGAAGAAATGCGAGCTCGTGATCTTTTCTATGCTTTGTGGATCCCTGATC 4550 Query 112120 TCTTCATGAAGAGAGTTGAGGA-GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCA 112178 | |||||| | || |||| || | |||| |||| ||| | || ||| | ||| Sbjct 4551 TTTTCATGCGTCGGGTGGAGGCTGATTCCCAAT-GGTCACTCATGTGCCCAAAGAAGTGT 4609 Query 112179 CCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAA 112238 || || || || | ||| ||||||||||| ||||||||| ||||| || || Sbjct 4610 CCAGGGCTGGAGGAAGTTTGGGGAGAGGAGTTTGAGGCCCTCTACGAGAAGTATGAAAAA 4669 Query 112239 GAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCT 112298 || | ||| | | | | || || | | ||||| |||| | | | Sbjct 4670 GAGGGGCGGTACAACAAGCAGATTCCTGCACGCCAGCTGTGGCGCAGTATTATTGAAGCC 4729 Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358 || ||||||||||| |||| ||| | |||||||| ||||| |||| ||| || Sbjct 4730 CAGGTGGAGACTGGTACTCCATTCATGGTCTACAAAGATGCCTGCAACCGCAAGTCCAAC 4789 Query 112359 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACA 112418 || ||||| ||||| || ||| | |||||| ||||| || || | | | ||| Sbjct 4790 CAGCAGAATGTGGGTACCATTAAGTGCAGCAACCTGTGTACTGAGATTGTTCAGT--ACA 4847 Query 112419 GACAA--AGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 112476 | |||||| | |||||||| || || ||||| | || || || || ||| Sbjct 4848 GCTCTGCAGATGAAATTGCTGTGTGCAATCTGGCATCCGTTGCCCTGAACATGTTTGTTC 4907 Query 112477 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAA 112536 || || | | | | ||||| ||| || || | ||| | |||||| Sbjct 4908 GCCCTGATGCCA---CCTATGATTTTGAGAAGCTGCGGCGTGTTGTTCATGTAGTCACAC 4964 Query 112537 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAAT 112593 ||||| |||| | | ||||| || | ||||| ||| ||| || ||| || Sbjct 4965 GCAACCTGAACAAAATCATTGAGGTCAACTACTACCCGGTTCCTGAG---GCACGTGCAT 5021 Query 112594 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTC 112653 |||| |||||||| ||||| ||||| | ||||| |||||||| || |||| ||||||| Sbjct 5022 CTAACATGAGACATCGTCCCATTGGAATTGGTGTTCAAGGTCTGGCAGATGCATTCATTT 5081 Query 112654 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGA 112713 | ||| | ||||||| || ||||| || ||||| | |||||||||| Sbjct 5082 TGATGCGCTATCCATTTGAGAGTGAGGAAGCACAGCGTCTCAATATTCAGATATTTGAGA 5141 Query 112714 CAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATG 112773 ||||||| | || || |||||||| || | || | || ||| |||||||||||| Sbjct 5142 CAATGTACTATGCTGCACTTGAGGCCAGCTGTGAACTTGCTGAGAAGTATGGTCCATATG 5201 Query 112774 AAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGG 112831 | || | ||||| ||| || || |||||| |||||| | ||| |||||| | Sbjct 5202 AGACTTACGAGGGCAGTCCTGC--CAGCAAGGGCAGGCTTCAGTATGACTTGTGGG-GTG 5258 Query 112832 TGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 ||| |||| || | | || |||| || || || || || || | || Sbjct 5259 TGACCCCAA-CTGACCTGTGGGATTGGGCAGCACTGAAAGAGAAAATTGCCAAGCATGGG 5317 Query 112890 CTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACA-AATCTTG 112946 || || | | || || | |||| |||||||| ||||| || || || || | ||||| Sbjct 5318 CTACGCA--ATTCATTGCTCCTGGCTCCAATGCCCACAGCATCAACGGCTCAGATTCTTG 5375 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCG 113006 || || ||||| | | || ||||||| | || | ||| | | | || | Sbjct 5376 GG-AACAATGAGTCTATCGAGGCCTACACTTCTAATGTGTATGTCCGCCGTGTTCTGTCC 5434 Query 113007 GGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066 || |||||| | | || ||| | || || || | ||||| | ||| ||||| ||| Sbjct 5435 GGTGAGTTTCAGGTCGTGAACCACCACCTGCTGAAAGACCTGACTGAGCGAGGTCTGTGG 5494 Query 113067 TCCAAGGATATGAAGGATC---TCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGT 113122 | || | ||| | | ||| || ||| ||||| ||||||||| | || Sbjct 5495 AGCCCTGAAGTCAAGAACCAGATCATTGCTGA----TGGTGGCTCCATTCAACAGATCAA 5550 Query 113123 GGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA 113182 || || ||| | || | ||| |||||| || || |||||||| |||| Sbjct 5551 GGGGATCCCAAACGACCTAAAGGCATTGTACAAAACGGTGTGGGAAATGTCACAGAAGAC 5610 Query 113183 TGTCATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATC 113241 ||| || | ||||| || || || ||| |||| |||||| || || || |||| Sbjct 5611 TGTGATGAAGATGGCTGCTGACCGCGGT-GCTTACATTGACCAGAGCCAGTCACTGAACA 5669 Query 113242 TATTCA-TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAG 113300 | || || | || | | | ||| ||| | | || ||||| |||| | |||||| Sbjct 5670 TCCACATTGCACAGCCGACCTATG-GGAAGATGTGCTCCATGCATCTGTATGGGTGGAAG 5728 Query 113301 AAGGGTCTCAAAACGGGGATGTATTACCT 113329 ||||| ||||| || ||||||||||| Sbjct 5729 GCTGGTCTGAAAACAGGCATGTATTACCT 5757 >seq16828 Length=21968 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 171431 GAAGAACCATACGAAGGCGCTACCGTCCTTGAAGCACAAAAGGGAGCGTATTATACACCA 171490 ||||||| | ||||| || || || | || || ||||||| ||| | ||| Sbjct 899 GAAGAACAGTTTGAAGGTGCCACTGTGATAGAGCCAGAAAAGGGTTTTTATAAGGAGCCA 958 Query 171491 ATTACAGCTCTAGATTTTGAAGCAC--TGTACCCATCTATCATGATGGCACACAATCTGT 171548 ||| || ||||||||||| ||| | ||||||||||||| ||||||||||||||| ||| Sbjct 959 ATTGCAACTCTAGATTTT--AGCTCTTTGTACCCATCTATTATGATGGCACACAATTTGT 1016 Query 171549 GTTATTCATCG 171559 |||||||| || Sbjct 1017 GTTATTCAACG 1027 >seq1046 Length=34766 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 16143 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATT 16201 |||||||||||||||||||||| || | | | || || || |||||| |||||||| Sbjct 18030 CCCACACCAACAAACATCTCCAGGAACTCAGACCCAGA-CACTGTGATGAAAGGGACATT 18088 Query 16202 AGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAG 16261 | ||| || ||| |||| ||| | |||||||| || || || || ||| | ||| Sbjct 18089 TGCTTCTCCAGCAGTGGCCTTGGCCAAGAGAGTCTTCCCAGTGCCAGGAGGACCTGTGAG 18148 Query 16262 GAGGGCACCTCGTGGAATCTTGGCGCC 16288 || ||| || ||| ||||||||||| Sbjct 18149 GATGGCGCCCTTTGGGATCTTGGCGCC 18175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620230667724720