Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq42356 114 2e-20 seq8136 105 8e-18 >seq42356 Length=8389 Score = 114 bits (126), Expect = 2e-20 Identities = 660/1043 (63%), Gaps = 31/1043 (3%) Strand=Plus/Minus Query 109411 AGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGT 109470 || |||||||| || ||||| |||||||||||||| | |||| |||||| || | | Sbjct 5757 AGGTAATACATGCCTGTTTTCAGACCAGCCTTCCACCCATACAGATGCATGGAGCACATC 5698 Query 109471 TTGGAAAGTGTCGGACTCTCCA-TAAACAAGTTCATCGACTGAGACTGATCGATGAATCG 109529 || | ||||| || | || | | ||||| ||||| ||| || ||| | Sbjct 5697 TTCCCATAGGTCGG-CTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGC 5639 Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589 ||| || ||||| ||||| | || | | ||| || |||||||| || || ||||| Sbjct 5638 ACCGCGGTCAGCAGCCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTA 5579 Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCAC 109649 ||| ||| | || | || || || ||| | |||||| ||||||||| ||| Sbjct 5578 CAATGCCTTTAGGTCGTTTGGGATCCCCTTGATCTGTTGAATGGAGCCACCA----TCAG 5523 Query 109650 CA-TGAGATCCTTCATCTCTTTCGA---CCAGAGACCGACCTTTTTGAGATCGTCAACAA 109705 || ||| | ||| | ||| | ||| ||||| || | || || | | | Sbjct 5522 CAATGATCTGGTTCTTGACTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCA 5463 Query 109706 GATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCG 109765 | || | ||| || || ||| ||||| | || || |||| || | |||| | Sbjct 5462 GGTGGTGGTTCACGACCTGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAG 5403 Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825 |||||| |||| | |||||||||| || || || || || || || ||||||||||| | Sbjct 5402 TGTAGGCCTCGATAGACTCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTG 5343 Query 109826 GAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCC 109885 |||||| ||| | || || || || | | | | ||| || ||| ||| Sbjct 5342 GAGCCAGGAGCAATGAATTGCGTAGCCCATGCTTGGCAATTTTCTCTTTCAGTGCTGCCC 5283 Query 109886 AATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCT 109945 |||| | | || | | | |||| | |||||| || ||||| |||| Sbjct 5282 AATCCCACAGGTCAGT-----TGGGGTCAC-ACCCCACAAGTCATACTGAAGCCTGCCCT 5229 Query 109946 CAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATG 110005 |||||| |||| | || |||| || | || | ||| || | || | Sbjct 5228 TGCTGGCAGGACTGCCCTCGTAAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGC 5169 Query 110006 AAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGC-GAGAC 110064 ||||| ||||| |||| ||||| |||||||| || ||| ||| | || || | | Sbjct 5168 TGGCCTCAAGTGCAGCATAGTACATTGTCTCAAATATCTGAATATTGA-GACGCTGTGCT 5110 Query 110065 TCTTCACAGTCGAAGGGA-AGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACC 110123 || |||| || || ||| || || || ||| || |||| || ||||| |||||||| Sbjct 5109 TCCTCACTCTCAAATGGATAGCGCATCAA-AATGAATGCATCTGCCAGACCTTGAACACC 5051 Query 110124 GAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTT 110183 | |||||||| ||||| |||||||||| || || || ||||| |||| Sbjct 5050 AATTCCAATGGGACGATGTCTCATGTTAGATGCACGTGCCTCAGGAACCGGGTAGTAGTT 4991 Query 110184 GCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTT-CATGG---AGTT 110239 | || |||| || || || || || | | ||| || | || | Sbjct 4990 GACCTCAATGATTTTGTTCAGGTTGCGTGTGAC----TACATGAACAACACGCCGCAGCT 4935 Query 110240 TGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAA 110299 | || |||| | || | || ||| | || || |||| || || | Sbjct 4934 TCTCAAAATCATAGGTG---GCATCAGGGCGAACAAACATGTTCAGGGCAACGGATGCCA 4878 Query 110300 GATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGG 110359 |||||||||||| | | || ||| | |||| | | ||| || ||||||| |||| Sbjct 4877 GATTGCACACAGCAATTTCATCTGCAGAGCTGTACTGAACAATCTCAGTACACAGGTTGC 4818 Query 110360 AACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGA 110419 | ||||||| ||||| |||| ||| || || ||| |||||| ||||| || |||| Sbjct 4817 TGCACTTAATGGTACCCACATTCTGCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGA 4758 Query 110420 GCATGTATGGGGTACCAGTTTCC 110442 |||| |||| |||||||| ||| Sbjct 4757 CCATGAATGGAGTACCAGTCTCC 4735 >seq8136 Length=40417 Score = 105 bits (116), Expect = 8e-18 Identities = 195/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 119454 TCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTTGATGAAGC 119513 ||| |||| |||||||| || |||| |||| |||||| || || || Sbjct 19036 TCTTTCGACGGTTTGTTGACCAGATGTTTGAACATGAGGCAGGCAAAGTCGCAGTGGAGG 19095 Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || || ||||| | ||| || |||||| |||||||||||| | || | ||| Sbjct 19096 CCCTCGTCGCGCGAGATCAACTCGTTGCTGAAGGTAAGTCCAGGCATAACGCCACGCTTC 19155 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| |||||||| ||||| || || ||||| ||||| ||||| || ||| Sbjct 19156 TTCAGCCAGAAGATGGCGGCGAAACTACCGGAGAAGAAAATGCCTTCCACCGCAGCAAAA 19215 Query 119634 GCGAATAGACGCTCAGCAAA--AGGTC-GAGACTTGTCGAACCACTTGAGAGCCCAGTTG 119690 |||| || ||| || ||||| || | || | | | |||||| || ||||||| | Sbjct 19216 GCGATTACACGTTCGGCAAACGTGGACTGATCATCCGCTATCCACTTCAGGGCCCAGTCG 19275 Query 119691 GCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 || || |||| | ||| || | |||| ||| || | ||| || Sbjct 19276 GCTTTGCGCTTAACGCAAGGCATGGTTTCGATTGCATTGAACAG 19319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588490455547800