Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq42356 141 1e-28 seq1046 87.8 2e-12 >seq42356 Length=8389 Score = 141 bits (156), Expect = 1e-28 Identities = 516/798 (65%), Gaps = 25/798 (3%) Strand=Plus/Minus Query 106136 CCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 106195 ||||| | |||||||| | ||| | ||||| | ||||||||| ||||| || | Sbjct 5214 CCCTCGTAAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCA 5155 Query 106196 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 106255 || | ||||| || ||||| || || ||| | || ||||| || |||||| Sbjct 5154 GCATAGTACATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAAT 5095 Query 106256 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 106315 | ||||| |||||| ||| |||| || |||||||||||||| | ||||| || | Sbjct 5094 GGATAGCGCATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGA 5035 Query 106316 TGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACT 106372 |||| ||| ||||| | | || | ||| ||| || || | || ||||||| | Sbjct 5034 TGTCTCATGTTAGA--TGCACG-TGCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATT 4978 Query 106373 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTG 106432 ||| || || || || | | | | || || ||| ||||| | ||| Sbjct 4977 TTGTTCAGGTTGCGTGTGACTACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGTG 4918 Query 106433 CGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCC 106489 | ||| | ||| || | ||||| | ||||||| |||||| ||||| Sbjct 4917 ------GCATCAGGGCGAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCA 4864 Query 106490 GTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTC 106549 | ||||| | |||||| | ||| || ||||||| |||| | |||||| || Sbjct 4863 ATTTCATCTGCAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTA 4804 Query 106550 CCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTC 106609 |||| ||||| ||||| ||| |||||| ||||| ||||||| |||| | || || Sbjct 4803 CCCACATTCTGCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTA 4744 Query 106610 CCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATC-GGCG-GCTGGTACAAT-G 106666 || |||||| ||| | | | ||| || | |||| | |||| || || ||| Sbjct 4743 CCAGTCTCCACCTGGGCTTCAATAAT--ACTGCGCCACAGCTGGCGTGCAGG---AATCT 4689 Query 106667 GC--GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCA 106724 || |||| ||| ||||| || ||||| ||||||||| ||||||||||| ||| Sbjct 4688 GCTTGTTGTACCGCCCCTCTTTTTCATACTTCTCGTAGAGGGCCTCAAACTCCTCTCCCC 4629 Query 106725 CCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCT 106784 | || || ||||| ||| | ||| || | || |||||||| | | ||| Sbjct 4628 AAACTTCCTCCAGCCCTGGACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCT 4569 Query 106785 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAG 106844 | ||||| ||||||||| || || ||||||| | | || ||||| | | || Sbjct 4568 CCACCCGACGCATGAAAAGATCAGGGATCCACAAAGCATAGAAAAGATCACGAGCTCGCA 4509 Query 106845 CCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATG 106904 ||||| | ||| ||| || | |||||| | || |||||| ||||| | Sbjct 4508 TTTCTTCCTTCCCTGTGTTCTTGCGAAGGGAAAGGAAGCTGAAGACATCCGCATGCCAAG 4449 Query 106905 GCTCAAGATAGACTGCGA 106922 |||| || |||| ||||| Sbjct 4448 GCTCCAGGTAGATTGCGA 4431 >seq1046 Length=34766 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 9450 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATT 9508 |||||||||||||||||||||| || | | | || || || |||||| |||||||| Sbjct 18030 CCCACACCAACAAACATCTCCAGGAACTCAGACCCAGA-CACTGTGATGAAAGGGACATT 18088 Query 9509 AGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAG 9568 | ||| || ||| |||| ||| | |||||||| || || || || ||| | ||| Sbjct 18089 TGCTTCTCCAGCAGTGGCCTTGGCCAAGAGAGTCTTCCCAGTGCCAGGAGGACCTGTGAG 18148 Query 9569 GAGGGCACCCCGTGGAATCTTGGCGCC 9595 || ||| ||| ||| ||||||||||| Sbjct 18149 GATGGCGCCCTTTGGGATCTTGGCGCC 18175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589494427203240