Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq29144 145 2e-29 >seq29144 Length=118640 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| || || || ||||| || || || || || ||||| ||| ||||| | Sbjct 105172 AGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGG 105113 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | ||||||||| |||||||| || || || |||||||| || || || || Sbjct 105112 CCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCC 105053 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || ||| || ||||||||||||||||| | |||||||| |||||| Sbjct 105052 TTATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACTTCGAGGGTA 104993 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| ||||| ||||| | ||||| Sbjct 104992 ATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| || || || ||||| || || || || || ||||| ||| ||||| | Sbjct 104716 AGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGG 104657 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | ||||||||| |||||||| || || || |||||||| ||||||||||| Sbjct 104656 CCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCC 104597 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || ||| |||||||||||||| || | || || || || || Sbjct 104596 TTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGAGTG 104537 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | || || ||||| | ||||| Sbjct 104536 ATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || || || ||||||||| || || | ||||||||| Sbjct 104479 ACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCG 104420 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || ||||| |||||||| || || || || Sbjct 104419 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGG 104360 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||||||| |||||||| || || ||||| || | ||||| Sbjct 104359 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACCTCAAGAGTGATGGTCTTG 104300 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 104299 CCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || || |||||||| ||| ||||| | ||||| || |||||| Sbjct 104929 TGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGC 104870 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| || || || ||||| |||||||| ||||| ||||| || || || Sbjct 104869 TTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 104810 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||||||||||||||| | || || || || || | ||||| || || Sbjct 104809 GCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGATGGTCTTGCCAGTG 104750 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 104749 AGGGTCTTCACGAAGATTTGCAT 104727 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| ||| || || | || || || Sbjct 105620 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 105561 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| | || || ||||| || || ||||| || ||||| || Sbjct 105560 AAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTG 105501 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||||||||| ||||| || | || || || ||||| | ||||| Sbjct 105500 GATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTT 105441 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 105440 GCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108544091168417