Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq16489 113 3e-20 seq29144 87.8 1e-12 >seq16489 Length=130489 Score = 113 bits (124), Expect = 3e-20 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||| | || |||| ||||| || || || ||||| Sbjct 52108 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGTTGCTTCCCAGCAAAA 52167 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||||||| ||||||||| | || | |||||||||||| ||||| ||||| || Sbjct 52168 ATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 52225 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || |||||| || || | ||| ||||| || ||||| | |||||| | Sbjct 52226 TCTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTCAAAGTCTTGA 52285 Query 34969 CAAAGATCTGCAT 34981 ||||||||||||| Sbjct 52286 CAAAGATCTGCAT 52298 >seq29144 Length=118640 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| |||| || | || ||| ||||| ||||| ||||| || | || || Sbjct 104713 CTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 104654 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| ||| || || || || || || || ||||||||| | || | || |||||| Sbjct 104653 TCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTG 104594 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| || ||| | || | || | | |||||| |||| || ||| Sbjct 104593 TCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGAGTGATG 104534 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| |||||||| |||||||||||| Sbjct 104533 GTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATA 104498 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| ||||| ||| | || |||| || Sbjct 104165 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCA 104106 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || ||||||||| | || | ||||||||| || Sbjct 104105 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGG 104046 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || | || | | |||||| || | ||| ||||| | Sbjct 104045 ATCTTGGCCTTCAC--ATTCTCGATGGTATCGCTAGGCTCAACCTCAAGGGTGATGGTCT 103988 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || | ||||| || |||||||||||| Sbjct 103987 TGCCGGTCAAGGTCTTGACGAAGATCTGCATA 103956 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| |||| || | || ||| ||||| ||||| ||||| || | || || Sbjct 105169 CTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 105110 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| ||| || ||||| || || || || ||||||||| | || | |||||||| Sbjct 105109 TCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTA 105050 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| ||| ||| | || | || | | ||| || |||| ||| ||| Sbjct 105049 TCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACTTCGAGGGTAATG 104990 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || || || || |||||||||||| Sbjct 104989 GTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCATA 104954 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||| ||||| ||||| ||| | || | || || Sbjct 105620 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 105561 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || | || |||||||| | || | ||||||||||| Sbjct 105560 AAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTG 105501 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| | || | || | | |||||| || | ||| ||||| || Sbjct 105500 GATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTT 105441 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || |||||||||||| Sbjct 105440 GCCAGTCAGCGTCTTAACGAAGATCTGCATA 105410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324372666715128