Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8136 176 8e-39 seq58039 98.7 2e-15 >seq8136 Length=40417 Score = 176 bits (194), Expect = 8e-39 Identities = 201/270 (74%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| || ||||| ||||||| |||||||||||| ||| | |||||| Sbjct 19424 GTACATCTCCGAGTGGACGTTCTCCATAGCGACCTGGAACCCGTAAAAGCAGCGGGCCTC 19483 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||| ||||| || ||| ||||| | ||||||||| ||||| |||||||| || Sbjct 19484 TGTCACTTGCACCTCCTGCCCGAACCTCTCGACCAGATTCTCGTTGACGATCCCATCCGA 19543 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || || |||||||| ||||| || | ||| |||||||||| || | | || | Sbjct 19544 GGCGGCGAAGAAGGCGAGGACGTGGGATATGAAGTGGCGCTCGTCGTCGTTCAGCTTCTC 19603 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 |||| || | |||| || || ||||| || ||||| |||||||||||||| ||| Sbjct 19604 CCAGTACTTCAGGTCTCTGGAGAGATCCACCTCCTCCACGGTCCAGAAGGACGCCTCTGC 19663 Query 48664 TTTTTTGTACATGCCCCATATGTCCGGATA 48693 || ||||||||| |||| ||||| || || Sbjct 19664 CTTCTTGTACATGGCCCAAATGTCGGGGTA 19693 Score = 113 bits (124), Expect = 8e-20 Identities = 218/317 (69%), Gaps = 11/317 (3%) Strand=Plus/Plus Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||| || || |||| ||||| | |||||| | |||||| || || | | ||| Sbjct 18909 ATCGGCCACAAACTCAATGTACTGCTTCATGAGCTGGCAGTTCATTCCAATCATGTCCAC 18968 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 ||| | ||||| || ||||| |||| ||| || |||||| || | | |||| | Sbjct 18969 GGGTAGTGCCTTAGTCAGAAATTCCTGCTCGATTGTCACGGCATCGGCAATAATCGCAGT 19028 Query 48082 AACGCGGGACTCT---GAGGGTTTGTTGCGCAGGTGCTTGG-CATAGAGCATGCAGGCAA 48137 || | |||| || ||||||||| ||| || ||| ||| ||| |||||||| Sbjct 19029 GACTCT---CTCTTTCGACGGTTTGTTGACCAGATGTTTGAACAT-GAG---GCAGGCAA 19081 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| | ||| | ||| ||||| || ||| | | ||||| |||| || ||||||| Sbjct 19082 AGTCGCAGTGGAGGCCCTCGTCGCGCGAGATCAACTCGTTGCTGAAGGTAAGTCCAGGCA 19141 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 | || || | || || |||||||| || || |||||| || |||||||| ||||| | Sbjct 19142 TAACGCCACGCTTCTTCAGCCAGAAGATGGCGGCGAAACTACCGGAGAAGAAAATGCCTT 19201 Query 48258 CCACTGCCGCGAACGCG 48274 |||| || || || ||| Sbjct 19202 CCACCGCAGCAAAAGCG 19218 >seq58039 Length=90278 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||| ||| ||| ||||||||||| || ||||||||||| |||||||| | ||| Sbjct 52860 CTTGAGGTGCTTAACTCGGTCCTCCAGCCGGGCAATGCGTTCCAGCTTGCGCCGCCTGCA 52801 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||||| | |||||| || | ||||| | ||| || ||||||||||| Sbjct 52800 CTTGGAAGCTGCGATGCGGTTGCGCTGCCTCTTCCTCTCCAGTTTTATGCGTTCCTGAGA 52741 Query 241609 CTCCATGTCGATCGGAGAC 241627 |||||| | |||||| ||| Sbjct 52740 CTCCATATTGATCGGGGAC 52722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930764856003840