Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq45058 174 1e-37 seq16072 138 7e-27 seq11869 107 1e-17 seq44505 96.9 2e-14 seq24396 89.7 3e-12 seq12510 87.8 1e-11 >seq45058 Length=7942 Score = 174 bits (192), Expect = 1e-37 Identities = 540/821 (66%), Gaps = 26/821 (3%) Strand=Plus/Plus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATG 475422 |||| |||||||| | || | ||||| ||||| |||||||| || | || |||| Sbjct 2828 CAACTGCTGGAGACACTCACTTGGGTGGAGAAGACTTTGATAACCGAATGGTGAATCAC- 2886 Query 475423 GTGTGTTGAAGATTTCAAGAGGAAA---AATAAAGT--TGATCTTTCAACATCTGCTAAA 475477 | |||| | || |||||| |||| || |||| ||| | | |||| | Sbjct 2887 -TTTGTTCAGGAGTTCAAGCGGAAGTACAAGAAAGACCTGACCAGT-AACAAGCGT---- 2940 Query 475478 GCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACT 475537 || | | || || |||| || ||||| || || ||||| | || || ||| | || Sbjct 2941 GCCCTGCGTCGACTGCGAACAGCATGTGAGCGAGCAAAGCGCACCCTCTCATCTTCAACC 3000 Query 475538 CAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACA 475597 || | | | ||||| | || || || | ||| || ||||| | | |||| || ||| Sbjct 3001 CAGGCCAGTATTGAAATAGACTCACTCTATGAGGGCATTGACTTTTATACCTCAATCACA 3060 Query 475598 AGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAA 475657 |||| ||| ||||| | | | ||||| || | || | || || || ||| Sbjct 3061 CGGGCCCGATTCGAAGAACTCAATGCAGATCTGTTCCGTTCCACCCTGGAGCCTGTGGAA 3120 Query 475658 CAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGA 475717 ||| ||| | ||| | ||| | |||||| | ||| ||||||| |||||||| || || Sbjct 3121 AAAGCCCTCCGTGATGCCAAAATGGACAAAGCTCAAATCCATGACATTGTTCTGGTTGGT 3180 Query 475718 GGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTTTCATCATATTTT-AATGGTAAAA 475775 || || || | |||||||| || |||| |||| || || | || ||||| || Sbjct 3181 GGATCCACTCGTATTCCAAAGATCC-AGAAGCTGCTG-CAGGATTTCTTCAATGGGAAGG 3238 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | | || | || | || || |||||||||||||||||||| || || || || |||| Sbjct 3239 ACCTGAACAAGAGCATCAACCCAGATGAAGCTGTTGCATATGGTGCAGCAGTACAGGCAG 3298 Query 475836 CTAT--TTTATCAGGTC-AATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTA 475891 | || | || | | ||||||| ||| | | |||| ||| | || ||| Sbjct 3299 CCATCCTGCATGGCGACAAATCAGAGGAGGTGCAGGA----CTTGTTGTTGCTGGATGTA 3354 Query 475892 ACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGA 475951 || ||||| ||| |||| ||||||| | || ||| | ||||| | || || | | Sbjct 3355 ACACCACTGTCACTAGGAATTGAAACTGCAGGTGGGGTGATGACCACCCTGATCAAGCGC 3414 Query 475952 AATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACA 476011 || ||| | |||||| ||| | | | ||| |||| || || || || || | Sbjct 3415 AACACTACCATCCCAACCAAGCAGACCCAGACATTCACCACATACTCGGACAACCAGCCT 3474 Query 476012 ACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT 476071 || || ||| | | || || || || | | || || || |||||| ||| Sbjct 3475 GGAGTGCTGATTCAAGTTTACGAGGGCGAGCGAGCAATGACCAAGGACAATAACCTTCTT 3534 Query 476072 GGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTT 476131 |||| ||| | || || ||||||||||| ||| | || ||||| || ||||| ||| Sbjct 3535 GGAAAGTTTGAGCTGACTGGAATTCCTCCTGCCCCCCGTGGTGTTCCCCAGATTGAGGTT 3594 Query 476132 ACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 |||||||| |||||||| |||||||| || ||||| ||||| Sbjct 3595 ACTTTTGACATTGATGCCAATGGTATCCTAAATGTGACTGC 3635 Score = 113 bits (124), Expect = 3e-19 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 474659 CCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCT 474717 || ||| |||| ||| |||||| || | || ||||| |||| || ||| | || || Sbjct 2190 CCTGAAGAAATCAGTTCCATGGTTCTAACGAAGATGAAGGAAACTGCCGAGGCC-TACCT 2248 Query 474718 TGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACG 474777 || | | || || ||||| || || ||||||||||| || || |||||||| || || Sbjct 2249 GGGGAAGGTGGTGACAGATGCCGTCATCACTGTTCCAGCCTACTTCAATGATTCCCAGCG 2308 Query 474778 TCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGA 474837 || || || ||||| || || | || || || || ||||| | || || || ||||| Sbjct 2309 ACAGGCTACCAAAGACGCAGGGACCATCGCTGGCCTCAATGTCCTGCGAATCATCAATGA 2368 Query 474838 ACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 |||||||||||||| |||| |||||| | || || Sbjct 2369 GCCAACAGCAGCCGCCATTGCCTATGGTTTAGACAA 2404 >seq16072 Length=23129 Score = 138 bits (152), Expect = 7e-27 Identities = 167/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTC 474711 ||| |||| ||| | || ||| ||||||| ||| ||||||||| | || ||| | Sbjct 14030 TTTGCACCAGAAGAGATCTCTGCAATGGTGTTAAGCAAAATGAAGGAGGTGGCTGAGG-C 13972 Query 474712 ATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTC 474771 ||| ||||| | |||| ||| |||| || |||| || ||||| || || ||||| | Sbjct 13971 ATACCTTGGGAAGAAAGTGACTCATGCTGTCGTTACCGTCCCAGCCTACTTCAATGACGC 13912 Query 474772 TCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTAT 474831 ||| || || ||||| |||||||| ||| |||||||| || ||||| | ||| | || Sbjct 13911 TCAGCGCCAGGCAACGAAAGATGCTGGAGTGATTGCAGGCCTCAATGTGATGCGTGTCAT 13852 Query 474832 TAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 ||||||||||| || || || |||||||||| ||||| ||||| Sbjct 13851 CAATGAACCAACTGCTGCTGCCATTGCTTATGGGCTTGACAAGAA 13807 >seq11869 Length=83137 Score = 107 bits (118), Expect = 1e-17 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||||||||||| || || || ||||| || |||||||| ||||||||||| || || Sbjct 64239 GTCACTGATGCAGTCATCACAGTCCCAGCCTACTTTAATGACTCTCAACGTCAGGCCACC 64298 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847 |||||||| || | || || || || || || | || || || ||||| || ||||| Sbjct 64299 AAAGATGCAGGGATCATCGCTGGGCTGAACGTCCTCCGCATCATCAATGAGCCTACAGCC 64358 Query 474848 GCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || || ||||| ||||| || || |||| Sbjct 64359 GCAGCCCTTGCCTATGGGCTGGACCAGAA 64387 >seq44505 Length=13134 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 ||||| || ||||| |||||||| | ||||||||||| || || || || || |||||| Sbjct 9663 GATGCCGTCATTACAGTTCCAGCTTCCTTTAATGATTCCCAGCGACAGGCTACCAAAGAT 9604 Query 474794 GCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCA 474853 || || | || || || || ||||| | || || || ||||| ||||||||||| || Sbjct 9603 GCAGGGACCATCGCTGGCCTCAATGTCCTGCGAATCATCAATGAGCCAACAGCAGCGGCC 9544 Query 474854 CTTGCTTATGG 474864 |||| ||||| Sbjct 9543 ATTGCGTATGG 9533 >seq24396 Length=28455 Score = 89.7 bits (98), Expect = 3e-12 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 474659 CCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCT 474717 |||||| |||| ||| ||||| | ||||||||| |||| || ||| | || || Sbjct 21950 CCGGAAGAAATCAGTTCCATGGTCCTGATCAAAATGAAGGAAACTGCCGAGGCC-TACCT 21892 Query 474718 TGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACG 474777 || | | || || ||||| || || ||||||||||| || || |||||||| || || Sbjct 21891 GGGGAAGGTGGTCACCGATGCCGTCATAACTGTTCCAGCCTACTTCAATGATTCACAGCG 21832 Query 474778 TCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGA 474837 || || || || ||||| || | || | || || || || | || || || ||||| Sbjct 21831 ACAGGCCACCAAGGATGCAGGGACCATCTCTGGCCTGAACGTCCTGCGAATCATAAATGA 21772 Query 474838 ACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 || ||||| || || |||| ||||| | || |||| Sbjct 21771 GCCGACAGCCGCTGCCATTGCATATGGCTTGGACAAGA 21734 >seq12510 Length=9163 Score = 87.8 bits (96), Expect = 1e-11 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTC 474711 |||| || || |||||| ||||||||| | ||||| |||| || |||| ||| | Sbjct 1806 TTTTACCCTGAGCAAATTAGTTCAATGGTCCTGGCCAATTTGAAGGAATCCGCAGAGA-C 1748 Query 474712 ATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATT 474770 | |||| | | |||| | || | || ||| | ||||| || || || || || || Sbjct 1747 ACATCTGAGG-ATGAAGGTGACCAACGCGGTAGTGACTGTCCCTGCCTACTTCAACGACG 1689 Query 474771 CTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTA 474830 | || | || || |||||||| || || | ||| || ||||| || || | | |||| Sbjct 1688 CGCAGAGACAGGCGACTAAAGACGCAGGGAAAATCGCTGGTCTGAACGTCCTCCAAATTA 1629 Query 474831 TTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 | ||||||||||||||||| || ||||||| || Sbjct 1628 TCAATGAACCAACAGCAGCGGCTATTGCTTACGG 1595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265350241615748