Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq47435 125 2e-23 seq42356 104 7e-17 seq17823 104 7e-17 >seq47435 Length=265562 Score = 125 bits (138), Expect = 2e-23 Identities = 171/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 302605 TAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCA 302664 |||||||| || ||||| |||||||||||||| ||||| | ||||| ||||||||| Sbjct 7011 TAACCAGTCTCAGCAGTTTTCACAGCTGTATCAATCAGACCCTCTCGACCTCCCATAGCA 6952 Query 302665 TGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCAC 302722 || ||||| | || | |||| | | || |||| ||| | ||||||||||||| Sbjct 6951 TGAAAGAAGAATTCCGATGGGGTCAGACCGGCCAGATAA--GAGTTTTCAACGAAACCAC 6894 Query 302723 GCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGT 302782 | | ||| || | ||| |||| | || || |||||||| | || | ||| Sbjct 6893 GTGACTCAGGGCCGTAGTCATCCTTGATGAAATGGGGCAGGGTTCGCTTGCGGAACCCGA 6834 Query 302783 ATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGaaa 302839 |||| ||||||||||| |||||||||||||| |||| || | ||| | ||| |||| Sbjct 6833 ATGGTATACGCTTTCCTTCAACGTTCTGCTGCCCCACACAAGCAATGACCTGTGAAA 6777 >seq42356 Length=8389 Score = 104 bits (114), Expect = 7e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 |||||||| || ||| || |||||||| || || ||| | || | | |||| Sbjct 4905 ACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTGCAGAGCTG 4846 Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || | ||||||||| |||||||| | ||| ||||| || | ||||| |||||| Sbjct 4845 TACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCTGCTGGTTG 4786 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 || || | ||| || ||||| ||||| | ||| |||| || || ||||||| ||| || Sbjct 4785 GACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCACCTGGGCT 4726 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTA 155797 || | ||| | |||| || | || ||| ||| ||||||||||| Sbjct 4725 TCAATAATACTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTA 4679 >seq17823 Length=25644 Score = 104 bits (114), Expect = 7e-17 Identities = 127/169 (75%), Gaps = 7/169 (4%) Strand=Plus/Plus Query 106924 CATACCATAGAAAAACTTGAACTTTTTACCATCTTCCTCAATTAACTTACCT--GGATTT 106981 ||| |||||||| || ||| |||| || |||||| ||| |||| || ||| ||||| Sbjct 21192 CATCCCATAGAACAATTTGTACTTCTTTCCATCTCTCTCGATTAGCTCGCCTCCGGATT- 21250 Query 106982 TCATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAATCAGCCCCGCCACCGAATGCT 107041 | || || || || || | ||| |||| |||||||||||| || || | || ||||| Sbjct 21251 -CGTCATGCCCAGCCAACATACCACCAAGCATTACGAAATCCGCACCTGCTCCAAATGCC 21309 Query 107042 TTAGCCATATCACCAGGGCAAGTAATTCCACCATCACT--AATAATATA 107088 ||||| | ||| |||||||| || ||||||||| || ||||||||| Sbjct 21310 TTAGCAACATCTCCAGGGCATGTGCATCCACCATC-CTGAAATAATATA 21357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470573918267487