Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq29144 116 3e-21 seq42356 113 4e-20 seq8136 87.8 2e-12 seq16489 86.0 6e-12 >seq29144 Length=118640 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | |||||||| || || || || ||||| |||||||| || | | | Sbjct 104955 ATGCAGATCTTCGTCAAAACGCTGACTGGCAAGACCATTACCCTCGAAGTGGAGCCTAGC 105014 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||| || || || || || || || || || Sbjct 105015 GACACCATTGAGAACGTGAAAGCAAAGATCCAGGATAAGGAGGGTATCCCCCCAGACCAG 105074 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||| |||||||| | | || || || ||| Sbjct 105075 CAGCGCCTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAAC 105134 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || || |||||||| || | || || || Sbjct 105135 ATCCAGAAGGAATCAACTCTCCATCTGGTGTTGAGACTTCGGGGCGG 105181 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || | || Sbjct 105639 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCTTCC 105698 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 105699 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGACCAG 105758 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | || || || ||| Sbjct 105759 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAAC 105818 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| ||||| |||| |||| || ||| Sbjct 105819 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTGCGCCTGCGTGGCGGC 105866 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || || || || ||||| || || || | | | Sbjct 103729 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAGACCATCACGCTTGAGGTTGAGCCTAGC 103788 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || || || ||||| Sbjct 103789 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 103848 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || |||||||||||| | | || |||||||| Sbjct 103849 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGTGATTATAAT 103908 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || || ||||| |||| |||| || || Sbjct 103909 ATCCAGAAGGAGTCGACGCTCCATCTGGTGCTGCGTCTGCGTGGTGG 103955 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| ||||| || || || || || || || || || || | | | Sbjct 105411 ATGCAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCTAGC 105470 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || ||||| || Sbjct 105471 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAG 105530 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || ||||| ||||| | | | || || || ||| Sbjct 105531 CAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGAGCGACTACAAC 105590 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || |||||||| | || |||| || || Sbjct 105591 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTTCGCCTGCGTGGTGG 105637 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || ||||| || || | | | Sbjct 104727 ATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104786 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| |||||||| ||||| || || Sbjct 104787 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 104846 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || |||||||||||| | | || || || || Sbjct 104847 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAAT 104906 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| ||||| || || ||||| |||| Sbjct 104907 ATCCAGAAGGAGTCGACCCTGCATTTGGTCCTGCG 104941 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || | | | Sbjct 104499 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104558 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| ||||| || || || || || Sbjct 104559 GATACCATTGAGAACGTGAAGGCTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 104618 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||| |||||||| | | || || || ||| Sbjct 104619 CAGCGCCTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAAC 104678 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || || |||||||| || | ||||| || Sbjct 104679 ATCCAGAAGGAATCAACTCTCCATCTGGTGTTGAGACTTCGCGGCGG 104725 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || || || || || || || | | | Sbjct 103957 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGCCTAGC 104016 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| || || || || || || || || || Sbjct 104017 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCAGACCAG 104076 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||||| |||||| | | | || || || ||| Sbjct 104077 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAAC 104136 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 || || ||||| ||||| || ||||||||| ||||| Sbjct 104137 ATCCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGA 104172 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || | || || || || || || || || || || | | | Sbjct 104271 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCGAGC 104330 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || || || ||||| Sbjct 104331 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 104390 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| || ||| | | | || ||||| ||| Sbjct 104391 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAAC 104450 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || ||||| || ||||| Sbjct 104451 ATCCAGAAGGAGTCTACACTTCATCTGGTG 104480 >seq42356 Length=8389 Score = 113 bits (124), Expect = 4e-20 Identities = 477/753 (63%), Gaps = 18/753 (2%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | ||||||||| ||||||| || || || || || || | || ||| | | Sbjct 5455 GTTCACGACCTGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGC 5396 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| | || || ||||| || |||||||||||||| | || || ||||| |||| Sbjct 5395 CTCGATAGACTCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAG 5336 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTC 138677 | | ||||| |||| || | ||||| ||| || || || | | ||| || Sbjct 5335 GAGCAATGAATTGCGTAGCCC---ATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATC 5279 Query 138678 CCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGG 138737 ||||| || | || | ||||| || ||||| | | | ||| || || || Sbjct 5278 CCACAGGTCAGTTGGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGG 5219 Query 138738 ACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAG 138797 |||||| ||||| | || ||| |||| ||| | || | || ||| ||||| || Sbjct 5218 ACTGCCCTCGTAAGTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAG 5159 Query 138798 CGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTC 138857 ||| ||||||| || || || ||||| |||||| | || || | ||||| Sbjct 5158 TGCAGCATAGTACATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTC 5099 Query 138858 GTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGG 138917 | || ||| | || |||| || || ||||| ||||| || || | ||| | || Sbjct 5098 AAATGGATAGCGCATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGG 5039 Query 138918 GCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGAT 138977 ||||| | || || || || ||| | | || || ||||| || || ||||| Sbjct 5038 ACGATGTCTCATGTTAGATGCACGTGCCTCAGGAACCGGGTAGTAGTTGACCTCAATGAT 4979 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 |||||| | || || ||| || | | | || | |||||||| || || Sbjct 4978 TTTGTTCAGGTTGCGTGTGACTACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGT 4919 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 | | | | | || ||||| |||| | || || || | ||||| Sbjct 4918 GGCATC----------AGGGCG--AACAAACATGTTCAGGGCAACGGATGCCAGATTGCA 4871 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 ||| || | ||| || | |||||| | ||||| || | ||||| || || ||||| Sbjct 4870 CACAGCAATTTCATCTGCAGAGCTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTT 4811 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || ||||| | ||| || || ||| || ||||| || ||||||||||| | ||| | Sbjct 4810 AATGGTACCCACATTCTGCTGGTTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAA 4751 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT 139250 || || ||||| ||||| || | || ||||| Sbjct 4750 TGGAGTACCAGTCTCCACCTGGGCTTCAATAAT 4718 >seq8136 Length=40417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 126032 TCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttA 126091 ||||||| ||| ||||||||| | || ||||| |||||||| || || || || | Sbjct 19219 TCGCTTTTGCTGCGGTGGAAGGCATTTTCTTCTCCGGTAGTTTCGCCGCCATCTTCTGGC 19160 Query 126092 TAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACG 126151 | |||| || | ||||| || || || ||||||||||||||||| || || |||| Sbjct 19159 TGAAGAAGCGTGGCGTTATGCCTGGACTTACCTTCAGCAACGAGTTGATCTCGCGCGACG 19100 Query 126152 AAGGACTCCATACGGACTTTGCATGTCT 126179 | || ||||| |||||||| || || Sbjct 19099 AGGGCCTCCACTGCGACTTTGCCTGCCT 19072 >seq16489 Length=130489 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || | || || || || || || || || || || ||| | Sbjct 52299 GATGCAGATCTTTGTCAAGACTTTGACGGGGAAGACCATCACCCTTGAGGTGGAGGCCTC 52240 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 52239 GGACACTATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCA 52180 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | || ||||| ||||| || ||||||||| | | | || || || || Sbjct 52179 GCAGCGACTAATTTTTGCTGGGAAGCAACTGGAGGATGGCCGCACCCTGAGCGACTACAA 52120 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| || ||||| ||||| || || |||| Sbjct 52119 CATCCAGAAGGAGTCGACCCTCCATCTTG 52091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449526710042280