Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq24907 125 6e-24 seq28487 123 2e-23 >seq24907 Length=104666 Score = 125 bits (138), Expect = 6e-24 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 || |||||||| || || | |||||||||||| || ||||||||||| |||||||| ||| Sbjct 11945 AGTGCCTTGGCAATGTCTGCCATGTTGACGATAACCGTCTTGATGCCATTGCCCTTGCCT 12004 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || || ||||| |||| ||| ||||| ||||| ||||| || || || ||| |||| Sbjct 12005 TCAACTTTGGCACAGAGGCGTGGCATCTTGTATCGGTAAAAGGCATCGCTAACACTGCGA 12064 Query 34624 TTAACGTTCACAGTCCCCATCGTGGCTGGTGT 34655 || || || ||| ||||||| ||| || ||| Sbjct 12065 TTGACATTGACACTCCCCATGGTGAATGCTGT 12096 >seq28487 Length=147086 Score = 123 bits (136), Expect = 2e-23 Identities = 97/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 || ||||||||||| | ||| ||||||||||||||| |||||||| ||||||||||| Sbjct 134714 CCGAGCGCCTTGGCAACGTCGACCATGTTGACGATGACGGTCTTGATCCCGTTGCCCTTC 134655 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616 ||||| |||||||| || || ||||| |||||||||||| ||||||||| ||| Sbjct 134654 CCTTCCACCTTGGCCACGAGACGAGGCATCTTGTAGCGGTAGTACGCGTCCGTCAC 134599 Score = 118 bits (130), Expect = 9e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 ||| | ||||| |||||||| || ||||| |||| || |||||||| ||||| || || Sbjct 134962 AGCACCGTCTCGGGGTTGTCGCACTCCGGGCACAGGACGAACTTGCGAATGAACCCGTCG 134903 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 || || ||||| | | | ||||||| |||||| || | ||| || ||||| ||| Sbjct 134902 AGAAGCTCCTGCAGGCGGTCCGCGTCGTGGCTGCCGTTCACCACGAACCGCTCGTTCTTG 134843 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | || | |||||| || || || |||||||| ||||||||||| ||||| Sbjct 134842 AAGTCAAACTGCGTCTGAGCACCGAGCTCGCATCCGAAGTACTTGGTCGG 134793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412509767081843