Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq29144 129 1e-24 >seq29144 Length=118640 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || | || || || || || ||||| |||||||||||| Sbjct 103957 TACCACCACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCAC 103898 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || || || ||||| || | || |||||||| | Sbjct 103897 TCAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGG 103838 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||| || || ||||| || || || || |||| || | Sbjct 103837 GAATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAA 103778 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| |||| || || ||||| |||||||| Sbjct 103777 CCTCAAGCGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | |||||| || || ||||| || || || ||||| ||||| || || Sbjct 104955 TACCACCACGGAGACGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGC 104896 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || || || || || || || || ||||| || | || || || |||| Sbjct 104895 TCAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAG 104836 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| || || ||||| || || || || ||||| || || |||| || | Sbjct 104835 GAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAA 104776 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||| || |||||||| || | ||||| || || || ||||| Sbjct 104775 CCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||| ||||| || || || || ||| | | || || || | || Sbjct 105157 TGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAACTGC 105098 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| || | || || ||||| || || || |||||||| || |||||| Sbjct 105097 TTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGGATCTTT 105038 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| || || ||||| || || |||| || ||||| | || || |||||||| ||| Sbjct 105037 GCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACTTCGAGGGTAATGGTCTTGCCAGTC 104978 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||| || || || |||||||| Sbjct 104977 AGCGTTTTGACGAAGATCTGCAT 104955 Score = 96.9 bits (106), Expect = 7e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| || || || || || ||||| || | || || || ||||| ||||||||| Sbjct 105340 CCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCC 105281 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || || ||||| || || ||||| || || || || |||| || || ||||| || Sbjct 105280 TTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTG 105221 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || | ||||| || || || ||||| Sbjct 105220 ATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980997558777389