Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq29144 104 6e-17 >seq29144 Length=118640 Score = 104 bits (114), Expect = 6e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||||||||| || || || || || || | |||||||| | ||| Sbjct 104958 CAGATCTTCGTCAAAACGCTGACTGGCAAGACCATTACCCTCGAAGTGGAGCCTAGCGAC 105017 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || |||||||| ||| || || || || || || || ||| || Sbjct 105018 ACCATTGAGAACGTGAAAGCAAA-GATCCAGGATAAGGAGGGTATCCCCCCAGACCAGCA 105076 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || ||||||||||| ||||||||||| ||||| | ||| || ||| |||||| | Sbjct 105077 GCGCCTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAACAT 105136 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| || || ||||| || || || ||||||||||| Sbjct 105137 CCAGAAGGAATCAACTCTCCATCTGGTGTTGAGACTTCG 105175 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| || | || |||||||| || ||| Sbjct 104583 AAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAGCAGCGCCTGATCTTCGCTGGTAAG 104642 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| ||||| | ||| || ||| |||||| ||||||| || || ||||| || Sbjct 104643 CAGTTGGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAAGGAATCAACTCTCCAT 104702 Query 206374 CTTGTTTTGAGACTTCG 206390 || || ||||||||||| Sbjct 104703 CTGGTGTTGAGACTTCG 104719 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| ||||| || || | ||||| |||| Sbjct 105198 AAGACCCTCACTGGAAAGACCATCACGTTGGAGGTTGAGCCTAGCGACACCATCGAGAAT 105257 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||||||| || ||| || | || |||||| Sbjct 105258 GTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAGCGCCTGATCTTC 105317 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | |||||||| | || || ||| |||||| ||||||| ||||| Sbjct 105318 GCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCC 105377 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || || || | || ||||| Sbjct 105378 ACGCTCCATCTGGTGCTCAGGCTTCG 105403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180822164747871