Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq7486 102 1e-16 >seq7486 Length=166660 Score = 102 bits (112), Expect = 1e-16 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 147382 GCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATG 147441 || |||||||| ||||||||| || |||| | | | ||| ||| | ||||| | | Sbjct 33406 GCATCCCAGATATGCACTCCCTTCTGCGACAGCTGCGTGGCGTCGGTGCATCCCCGTACG 33347 Query 147442 AACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGG 147501 ||||| ||||||||||||| || ||| |||| | ||||||||||||||||||| ||| Sbjct 33346 AACCACAGCAGCTCCTCCACCACTCCCTTCCAGTACACCCTCTTGGTGGTCAGCATCGGG 33287 Query 147502 AACTGG---TCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTG 147558 || | |||| || | ||| | ||| | ||||||| ||||| |||||| Sbjct 33286 AAGACGCCATCCCGCAATGTGAACCGCATCTGCGCACCAAACATAGACATGGTGCCCACC 33227 Query 147559 CCCGTCCTGTCCTCCCTGCG 147578 || |||| || ||| |||| Sbjct 33226 CCAGTCCGATCGTCCTTGCG 33207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 146763 CCTTTTTTCCTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAG 146822 ||||||||| |||| |||| |||| | || ||| ||||| | ||| || | || Sbjct 34135 CCTTTTTTC--AAACAGCCATTTCCATCGCTATCTTGGGATGCGGCTTGTAACCAACCAG 34078 Query 146823 GGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTT 146882 |||| || ||||| |||| || || |||| || ||| || | || ||||| Sbjct 34077 CTCAAAGTCGTCTGCAGTGAAGTCCTCAATGTTGTCAACCTTCCGCTTGATGACCAGCTT 34018 Query 146883 GGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTA 146942 ||||||||||| || | | |||||| |||||| |||| |||||| ||||| Sbjct 34017 TGGGAAGGGTCGAGGCTCGCGCTTCAGCTGCTCCTTCAGGCAGTCCATGTGGTTCAGGTA 33958 Query 146943 GACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 ||||| ||||| ||||| || |||||||| || || |||| Sbjct 33957 AACGTGTGCGTCGCCCAGAGTATGCACAAATTCACCAGGCT 33917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583006979786400