Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq29144 122 8e-23 seq16489 109 5e-19 >seq29144 Length=118640 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||| | ||||| ||| | ||| |||||| || |||||||| ||| | Sbjct 105409 CCGCCACGAAGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 105350 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || |||| ||||||||||| | |||| Sbjct 105349 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 105290 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | | | | |||||||| | || ||| Sbjct 105289 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACC 105230 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||||| || || || || | || ||||| || || ||||| Sbjct 105229 TCCAACGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| ||| | ||| |||||| || || || ||||| | Sbjct 103955 CCACCACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTC 103896 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||||||||| || || || || | |||||||| || | ||| Sbjct 103895 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 103836 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||| ||| ||||| ||||| | | | | |||||||| | || ||| Sbjct 103835 ATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACC 103776 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | |||||| || || || |||| ||||||||||| |||||||| ||| Sbjct 103775 TCAAGCGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATACTG 103725 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||| | ||||| ||| | ||| |||||| || |||||||||||| | Sbjct 104497 CCGCCACGAAGCCTGAGCACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTC 104438 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || || | |||||||| || | ||| Sbjct 104437 AGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGA 104378 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||| ||| |||||| ||| | | | | |||||||||| || ||| Sbjct 104377 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACC 104318 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || ||||| || || || || |||||||| Sbjct 104317 TCAAGAGTGATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || |||| || |||||||| || || || Sbjct 105602 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 105543 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 105542 GATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 105483 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | || ||||||| ||||| || || || |||| || || || Sbjct 105482 CTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTAAC 105423 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 105422 GAAGATCTGCAT 105411 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || |||| ||||||||||| || || || Sbjct 105830 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 105771 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | | ||||||||| |||||| ||||| | | Sbjct 105770 GATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 105711 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| | || ||||||| ||||| || || || |||| || ||||| Sbjct 105710 CTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 105651 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 105650 GAAGATCTGCAT 105639 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | ||| |||||| || |||||||| ||| || ||| || | || Sbjct 104169 CAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 104110 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || |||||||| || || || |||| ||||||||||| | || | | |||||| || Sbjct 104109 CTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCCTCCTTATC 104050 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | | || ||||| | || ||||| | ||||| || Sbjct 104049 CTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTCAAGGGTGATGGT 103990 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| || || || || |||||||| Sbjct 103989 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||||| | || |||||| || || ||||| ||| | Sbjct 104953 CCACCACGGAGACGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTC 104894 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||||||||| || || || |||| ||||||||||| | |||| Sbjct 104893 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 104834 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||||| | | | |||||||| | || ||| Sbjct 104833 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACC 104774 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || ||||| || || ||||| Sbjct 104773 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 |||||||||| ||| | || ||||| || |||||||| ||| || || || | Sbjct 104713 CTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 104654 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || |||| ||||||||| || || |||| ||||||||||| | |||| || |||||| Sbjct 104653 TCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCCTTG 104594 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 || |||||| ||||| | | | || ||||| | || ||||| | ||||| Sbjct 104593 TCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGAGTGATG 104534 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || | || ||||| || |||||||| Sbjct 104533 GTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 |||||||||| ||| | || ||||| || |||||||| ||| || || || | Sbjct 105169 CTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 105110 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || |||| ||||||||| || || |||| ||||||||||| | || | | |||||| Sbjct 105109 TCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTA 105050 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| ||||||| |||| | | | |||||||| | ||||| || | || || Sbjct 105049 TCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACTTCGAGGGTAATG 104990 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || |||| ||||| || || |||||||| Sbjct 104989 GTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 >seq16489 Length=130489 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || ||||| ||||| || ||||| Sbjct 52107 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGTTGCTTCCCAGCAAA 52166 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | | |||||||||| |||||| ||| | | | Sbjct 52167 AATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 52226 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | |||||||| | ||||| || || ||||||||||| || || Sbjct 52227 CTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTCTTCCCCGTCAAAGTCTTGAC 52286 Query 35725 AAATATCTGCATTCT 35739 ||| |||||||| || Sbjct 52287 AAAGATCTGCATCCT 52301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450421971391080